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  2. PDF - peptide deformylase, mitochondrial Gene

PDF - peptide deformylase, mitochondrial Gene

中文名称:肽脱甲酰酶,线粒体

种属: Homo sapiens

基因 ID: 64146 | 基因类型: protein coding

关于 PDF

Cytogenetic location: 16q22.1 Genomic coordinates (GRCh38): 16:69,326,913-69,330,588 (from NCBI)

This gene has 1 transcript (splice variant) and 178 orthologues. Ubiquitous expression in kidney (RPKM 13.2), testis (RPKM 10.1) and 25 other tissues.

功能概要

在甲硫氨酰-tRNA 甲酰基转移酶 (FMT) 对甲硫氨酸进行甲酰化并将带电荷的引发剂 f-met tRNA 转移到核糖体后,蛋白质合成就开始了。在真细菌和真核细胞器中,该基因的产物肽去甲酰基酶 (PDF) 从新生肽的起始甲硫氨酸中去除甲酰基。在真细菌中,新生肽的去甲酰基化是甲硫氨酸氨肽酶随后裂解起始甲硫氨酸所必需的。 PDF 的天然抑制剂放线菌素在某些细菌中充当抗菌剂的发现促使人们对细菌特异性 PDF 抑制剂的设计进行了深入研究。在人类细胞中,只有线粒体蛋白具有起始甲硫氨酸的 N-甲酰化。 PDF 的蛋白抑制剂或 PDF 的 siRNA 可阻断癌细胞系的生长,但对正常细胞生长没有影响。因此,在人类中,PDF 功能可能仅限于快速生长的细胞。[RefSeq 提供,2008 年 11 月]

Protein synthesis proceeds after formylation of methionine by methionyl-tRNA formyl transferase (FMT) and transfer of the charged initiator f-met tRNA to the ribosome. In eubacteria and eukaryotic organelles the product of this gene, peptide deformylase (PDF), removes the formyl group from the initiating methionine of nascent Peptides. In eubacteria, deformylation of nascent Peptides is required for subsequent cleavage of initiating methionines by methionine Aminopeptidase. The discovery that a natural inhibitor of PDF, actinonin, acts as an antimicrobial agent in some bacteria has spurred intensive research into the design of bacterial-specific PDF inhibitors. In human cells, only mitochondrial proteins have N-formylation of initiating methionines. Protein inhibitors of PDF or siRNAs of PDF block the growth of Cancer cell lines but have no effect on normal cell growth. In humans, PDF function may therefore be restricted to rapidly growing cells. [provided by RefSeq, Nov 2008]

PDF 基因产物(1)

mRNA Protein Name
NM_022341.2 NP_071736.1 peptide deformylase, mitochondrial precursor
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables peptide deformylase activity IDA
IDA: 通过直接分析推断
15489958 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in N-terminal protein amino acid modification IDA
IDA: 通过直接分析推断
15489958 GOA
involved in peptidyl-methionine modification IDA
IDA: 通过直接分析推断
15489958 GOA
involved in positive regulation of cell population proliferation IMP
IMP: 通过突变表型推断
15489958 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in mitochondrion IDA
IDA: 通过直接分析推断
15489958 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

PDF 蛋白结构

Pep_deformylase

Pep_deformylase: Polypeptide deformylase (66 - 232)

  • 0
  • 100
  • 200
  • 243 a.a.
蛋白主名 其他名称

peptide deformylase, mitochondrial

peptide deformylase-like protein

关联疾病

疾病名称 别名
Sennetsu Fever

Sennetsu Ehrlichiosis

Human Ehrlichial Infection, Sennetsu Type

Mycobacterium Tuberculosis 1

Tuberculosis

Tuberculoma

Tuberculosis, Susceptibility To

Mycobacterium Tuberculosis, Susceptibility To, 1

Mtbs1

TB

Bacterial Infectious Disease

Bacterial Infections

Bacterial Infection Nos

Disease Caused By Bacteria

Bacterial Disease Or Disorder

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus PDF MGD MGI:1915273
Bos taurus PDF VGNC VGNC:49562
Macaca mulatta PDF VGNC VGNC:104744
Rattus norvegicus PDF RGD RGD:1582894
Felis catus PDF VGNC VGNC:64081
Canis familiaris PDF VGNC VGNC:49608
Macaca fascicularis PDF NCBI
Others PDF NCBI