1. Academic Validation
  2. Bifunctional small molecules that mediate the degradation of extracellular proteins

Bifunctional small molecules that mediate the degradation of extracellular proteins

  • Nat Chem Biol. 2021 Sep;17(9):947-953. doi: 10.1038/s41589-021-00851-1.
David F Caianiello 1 Mengwen Zhang 1 2 Jason D Ray 1 Rebecca A Howell 1 Jake C Swartzel 1 3 Emily M J Branham 1 Egor Chirkin 1 Venkata R Sabbasani 1 Angela Z Gong 1 David M McDonald 1 Viswanathan Muthusamy 4 David A Spiegel 5
Affiliations

Affiliations

  • 1 Department of Chemistry, Yale University, New Haven, CT, USA.
  • 2 Department of Molecular Biophysics and Biochemistry, Yale University, New Haven, CT, USA.
  • 3 Department of Molecular, Cellular, and Developmental Biology, Yale University, New Haven, CT, USA.
  • 4 Yale Center for Precision Cancer Modeling, Yale University School of Medicine, New Haven, CT, USA.
  • 5 Department of Chemistry, Yale University, New Haven, CT, USA. david.spiegel@yale.edu.
Abstract

Targeted protein degradation (TPD) has emerged as a promising therapeutic strategy. Most TPD technologies use the ubiquitin-proteasome system, and are therefore limited to targeting intracellular proteins. To address this limitation, we developed a class of modular, bifunctional synthetic molecules called MoDE-As (molecular degraders of extracellular proteins through the asialoglycoprotein receptor (ASGPR)), which mediate the degradation of extracellular proteins. MoDE-A molecules mediate the formation of a ternary complex between a target protein and ASGPR on hepatocytes. The target protein is then endocytosed and degraded by lysosomal proteases. We demonstrated the modularity of the MoDE-A technology by synthesizing molecules that induce depletion of both antibody and proinflammatory cytokine proteins. These data show experimental evidence that nonproteinogenic, synthetic molecules can enable TPD of extracellular proteins in vitro and in vivo. We believe that TPD mediated by the MoDE-A technology will have widespread applications for disease treatment.

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