1. Gene
  2. Scn8a - sodium voltage-gated channel alpha subunit 8 Gene

Scn8a - sodium voltage-gated channel alpha subunit 8 Gene

中文名称:钠电压门控通道 α 亚基 8

种属: Rattus norvegicus

基因 ID: 29710 | 基因类型: protein coding

关于 Scn8a

Primary_assembly 7: 131,982,480-132,151,292 forward strand.mRatBN7.2:CM026980.1

This gene has 3 transcripts (splice variants), 276 orthologues, 26 paralogues and is associated with 30 phenotypes. Biased expression in Brain (RPKM 284.3), Testes (RPKM 17.1) and 2 other tissues.

功能概要

该基因编码的蛋白可启动钠离子结合活性和电压门控钠通道活性。参与神经系统发育;神经元动作电位;和钠离子运输。位于轴突起始段;朗飞节点;和质膜。是膜的组成部分。电压门控钠通道复合体的一部分。在谷氨酸能突触和平行纤维到浦肯野细胞突触中活跃。是突触后密度膜的组成部分和突触前活动区膜的组成部分。充血性心力衰竭的生物标志物。该基因的人类直系同源基因与良性家族性新生儿癫痫以及发育和癫痫性脑病 13 相关。与人类 SCN8A(钠电压门控通道 α 亚基 8)直系同源基因。 [由基因组资源联盟提供,2022 年 4 月]

Enables sodium ion binding activity and voltage-gated Sodium Channel activity. Involved in nervous system development; neuronal action potential; and sodium ion transport. Located in axon initial segment; node of Ranvier; and plasma membrane. Is integral component of membrane. Part of voltage-gated Sodium Channel complex. Is active in glutamatergic synapse and parallel fiber to Purkinje cell synapse. Is integral component of postsynaptic density membrane and integral component of presynaptic active zone membrane. Biomarker of congestive heart failure. Human ortholog(s) of this gene implicated in benign familial neonatal epilepsy and developmental and epileptic encephalopathy 13. Orthologous to human SCN8A (sodium voltage-gated channel alpha subunit 8). [provided by Alliance of Genome Resources, Apr 2022]

Scn8a 基因产物(1)

mRNA Protein Name
NM_019266.3 NP_062139.2 sodium channel protein type 8 subunit alpha
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
15282281 RGD
enables voltage-gated sodium channel activity IDA
IDA: 通过直接分析推断
9603190 RGD
enables voltage-gated sodium channel activity IMP
IMP: 通过突变表型推断
17273863 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in myelination IEP
IEP: 通过表达模式推断
16652168 RGD
involved in neuronal action potential IDA
IDA: 通过直接分析推断
15917456 RGD
involved in neuronal action potential IMP
IMP: 通过突变表型推断
17273863 RGD
involved in optic nerve development IEP
IEP: 通过表达模式推断
22473424 RGD
involved in peripheral nervous system development IEP
IEP: 通过表达模式推断
16652168 RGD
involved in sodium ion transport IDA
IDA: 通过直接分析推断
9603190 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in axon IDA
IDA: 通过直接分析推断
21118538 RGD
located in axon initial segment IDA
IDA: 通过直接分析推断
11724816 RGD
is active in glutamatergic synapse IDA
IDA: 通过直接分析推断
10779552 RGD
located in node of Ranvier IDA
IDA: 通过直接分析推断
16652168 RGD
is active in parallel fiber to Purkinje cell synapse IDA
IDA: 通过直接分析推断
10779552 RGD
is active in postsynaptic density membrane IDA
IDA: 通过直接分析推断
10779552 RGD
is active in presynaptic active zone membrane IDA
IDA: 通过直接分析推断
10779552 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Scn8a 蛋白结构

Ion_trans

Ion_trans: pfam00520 (130 - 420)

Na_trans_cytopl

Na_trans_cytopl: pfam11933 (545 - 699)

Ion_trans

Ion_trans: pfam00520 (749 - 962)

Na_trans_assoc

Na_trans_assoc: pfam06512 (988 - 1189)

Ion_trans

Ion_trans: pfam00520 (1194 - 1470)

Na_channel_gate

Na_channel_gate: cd13433 (1462 - 1514)

Ion_trans

Ion_trans: pfam00520 (1519 - 1773)

GPHH

GPHH: cl25190 (1785 - 1832)

IQ

IQ: smart00015 (1891 - 1912)

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  • 1978 a.a.
蛋白主名 其他名称

sodium channel protein type 8 subunit alpha

Na+ channel

PN4

naCh6

peripheral nerve protein type 4

sodium channel 6

sodium channel protein type VIII subunit alpha

sodium channel, voltage gated, type VIII, alpha subunit

sodium channel, voltage-gated, type 8, alpha polypeptide

sodium channel, voltage-gated, type 8, alpha subunit

sodium channel, voltage-gated, type VIII, alpha polypeptide

voltage-gated sodium channel subunit alpha Nav1.6

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Scn8a NCBI NCBI:6334