1. Gene
  2. WDR4 - WD repeat domain 4 Gene

WDR4 - WD repeat domain 4 Gene

中文名称:WD 重复域 4

种属: Homo sapiens

同用名: hWH; Wuho; MIGSB; TRM82; GAMOS6; TRMT82

基因 ID: 10785 | 基因类型: protein coding

关于 WDR4

Cytogenetic location: 21q22.3 Genomic coordinates (GRCh38): 21:42,843,094-42,892,998 (from NCBI)

This gene has 7 transcripts (splice variants), 189 orthologues and is associated with 4 phenotypes. Ubiquitous expression in lymph node (RPKM 3.3), appendix (RPKM 3.2) and 25 other tissues.

功能概要

该基因编码 WD 重复蛋白家族的一个成员。 WD 重复是大约 40 个氨基酸的最小保守区域,通常由 gly-his 和 trp-asp (GH-WD) 括起来,这可能有助于异源三聚体或多蛋白复合物的形成。该家族的成员参与多种细胞过程,包括细胞周期进程、信号转导、细胞凋亡和基因调控。该基因作为一种非综合征性耳聋 (DFNB10) 的候选基因被排除在外,但仍然是映射到 21q22.3 的其他疾病以及唐氏综合症表型发展的候选基因。已发现该基因的可变剪接转录物变体。[RefSeq 提供,2012 年 5 月]

This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 Amino acids typically bracketed by gly-his and trp-asp (GH-WD), which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes, including cell cycle progression, signal transduction, Apoptosis, and gene regulation. This gene is excluded as a candidate for a form of nonsyndromic deafness (DFNB10), but is still a candidate for other disorders mapped to 21q22.3 as well as for the development of Down syndrome phenotypes. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, May 2012]

WDR4 基因产物(6)

mRNA Protein Name
NM_001260474.2 NP_001247403.1 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 2
NM_001260475.2 NP_001247404.1 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 3
NM_001260476.2 NP_001247405.1 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 3
NM_001260477.2 NP_001247406.1 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 3
NM_018669.6 NP_061139.2 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 1
NM_033661.5 NP_387510.1 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables enzyme activator activity IDA
IDA: 通过直接分析推断
36599982 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
15861136 GOA
enables tRNA methyltransferase activator activity IDA
IDA: 通过直接分析推断
36599982 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in tRNA (guanine-N7)-methylation IDA
IDA: 通过直接分析推断
36599982 GOA
involved in tRNA modification IDA
IDA: 通过直接分析推断
15861136 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in nucleus IDA
IDA: 通过直接分析推断
15861136 GOA
part of tRNA (m7G46) methyltransferase complex IDA
IDA: 通过直接分析推断
36599982 GOA
part of tRNA methyltransferase complex IDA
IDA: 通过直接分析推断
12403464 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

WDR4 蛋白结构

WD40

WD40: WD domain, G-beta repeat (143 - 171)

WD40

WD40: WD domain, G-beta repeat (185 - 217)

  • 0
  • 100
  • 200
  • 300
  • 412 a.a.
蛋白主名 其他名称

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4

TRM82 tRNA methyltransferase 82 homolog

WDR4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra WDR4 P57081 RABGGTB Homo sapiens P53611
Y2H Prey Pooling
25416956
Intra WDR4 P57081 RABGGTB Homo sapiens P53611
Y2H Prey Pooling
32296183
Intra WDR4 P57081 RABGGTB Homo sapiens P53611
Y2H Array
25416956
Intra WDR4 P57081 RABGGTB Homo sapiens P53611
Y2H Array
32296183
Intra WDR4 P57081 FEN1 Homo sapiens P39748
Pull Down
26751069
Intra WDR4 P57081 FEN1 Homo sapiens P39748
Fluorescence Spectr
26751069
Intra WDR4 P57081 FEN1 Homo sapiens P39748
Anti Tag CoIP
26751069
Intra WDR4 P57081 FEN1 Homo sapiens P39748
Anti Bait CoIP
26751069
Intra WDR4 P57081 METTL1 Homo sapiens Q9UBP6
Y2H Prey Pooling
32296183
Intra WDR4 P57081 METTL1 Homo sapiens Q9UBP6
Y2H Prey Pooling
25416956
Intra WDR4 P57081 METTL1 Homo sapiens Q9UBP6
Validated Y2H
32296183
Intra WDR4 P57081 METTL1 Homo sapiens Q9UBP6
Y2H Array
25416956
Intra WDR4 P57081 METTL1 Homo sapiens Q9UBP6
Y2H Array
32296183
Intra WDR4 P57081 METTL1 Homo sapiens Q9UBP6
Anti Tag CoIP
33961781
Intra WDR4 P57081 METTL1 Homo sapiens Q9UBP6
Anti Tag CoIP
26751069
Intra WDR4 P57081 FAM118A Homo sapiens Q9NWS6
Y2H Array
25416956
Intra WDR4 P57081 FAM118A Homo sapiens Q9NWS6
Y2H Array
32296183
Intra WDR4 P57081 FAM118A Homo sapiens Q9NWS6
Validated Y2H
32296183
Intra WDR4 P57081 FAM118A Homo sapiens Q9NWS6
Y2H Prey Pooling
25416956
Intra WDR4 P57081 FAM118A Homo sapiens Q9NWS6
Y2H Prey Pooling
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Microcephaly, Growth Deficiency, Seizures, And Brain Malformations

MIGSB

Galloway-Mowat Syndrome 6

GAMOS6

Galloway-Mowat Syndrome

Galloway Mowat Syndrome

Galloway Syndrome

Hiatal Hernia-Microcephaly-Nephrosis, Galloway Type

Microcephaly Nephrosis Syndrome

Microcephaly, Hiatal Hernia, And Nephrotic Syndrome

Nephrosis Neuronal Dysmigration Syndrome

Microcephaly-Hiatus Hernia-Nephrotic Syndrome

Nephrosis-Neuronal Dysmigration Syndrome

Galloway-Mowat Syndrome 1

Galloway Syndrome

Nephrosis-Neuronal Dysmigration Syndrome

Nephrosis-Microcephaly Syndrome

Camos

Scar5

GAMOS1

Microcephaly, Hiatal Hernia, And Nephrotic Syndrome

Microcephaly, Hiatal Hernia And Nephrotic Syndrome

Cerebellar Ataxia With Mental Retardation, Optic Atrophy, And Skin Abnormalities

Spinocerebellar Ataxia, Autosomal Recessive 5, Formerly

Scar5, Formerly

Spinocerebellar Ataxia Autosomal Recessive 5

Cerebellar Ataxia With Intellectual Disability Optic Atrophy And Skin Abnormalities

Camos Syndrome

Cerebellar Ataxia-Intellectual Disability-Optic Atrophy-Skin Abnormalities Syndrome

Galloway-Mowat Syndrome

Spinocerebellar Ataxia, Autosomal Recessive, 5

Galloway Mowat Syndrome

Spinocerebellar Ataxia, Autosomal Recessive 5

Seckel Syndrome

Microcephalic Primordial Dwarfism

Bird-Headed Dwarfism

Harper'S Syndrome

Virchow-Seckel Dwarfism

Nanocephalic Dwarfism

Sckl

Seckel-Type Dwarfism

Lissencephaly

Pachygyria

Broad Gyri Of Cerebrum

Large Gyri Of Cerebrum

Macrogyria

Isolated Growth Hormone Deficiency, Type Ia

Ighd Ia

Primordial Dwarfism

Isolated Growth Hormone Deficiency Type Ia

Sexual Ateleiotic Dwarfism

Pituitary Dwarfism I

IGHD1A

Illig-Type Growth Hormone Deficiency

Growth Hormone Deficiency, Isolated, Type Ia

Congenital Ighd Type Ia

Congenital Isolated Gh Deficiency Type Ia

Congenital Isolated Growth Hormone Deficiency Type Ia

Pituitary Dwarfism 1

Growth Hormone Deficiency, Isolated, Autosomal Recessive

Autosomal Recessive Isolated Growth Hormone Deficiency

Isolated Growth Hormone Deficiency Type 1a

Congenital Ighd

Congenital Isolated Gh Deficiency

Congenital Isolated Growth Hormone Deficiency

Growth Hormone Deficiency, Isolated Autosomal Recessive

Illig Type Growth Hormone Deficiency

Non-Acquired Isolated Growth Hormone Deficiency

Growth Hormone Deficiency, Isolated, 1a

Growth Hormone Deficiency Isolated Autosomal Recessive

Dwarfism, Primordial

Dwarfism

Polymicrogyria

Pmg

Microcephaly

Microencephaly

Microcephalus

Microcephalic

Nanocephaly

Congenital Microcephaly

Brain Hypoplasia

Brain Nondevelopment

Cephalic Hypoplasia

Undeveloped Cerebrum

Undeveloped Brain

Micrencephalon

Micrencephaly

Non-Syndromic X-Linked Intellectual Disability

X-Linked Non-Syndromic Intellectual Disability

Non-Specific X-Linked Mental Retardation

X-Linked Non-Specific Intellectual Disability

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta WDR4 VGNC VGNC:81794
Bos taurus WDR4 VGNC VGNC:36897
Rattus norvegicus WDR4 RGD RGD:1585179
Canis familiaris WDR4 VGNC VGNC:48365
Mus musculus WDR4 MGD MGI:1889002
Felis catus WDR4 VGNC VGNC:67031
Others WDR4 NCBI