1. Gene
  2. RABGGTB - Rab geranylgeranyltransferase subunit beta Gene

RABGGTB - Rab geranylgeranyltransferase subunit beta Gene

中文名称:Rab 香叶基香叶基转移酶 β 亚基

种属: Homo sapiens

同用名: GGTB

基因 ID: 5876 | 基因类型: protein coding

关于 RABGGTB

Cytogenetic location: 1p31.1 Genomic coordinates (GRCh38): 1:75,786,194-75,795,090 (from NCBI)

This gene has 14 transcripts (splice variants), 227 orthologues and 2 paralogues. Ubiquitous expression in adrenal (RPKM 28.6), kidney (RPKM 27.1) and 25 other tissues.

功能概要

该基因编码 Rab 香叶基香叶基转移酶 (RabGGTase) 的 β 亚基,该酶属于蛋白质异戊二烯基转移酶家族。 RabGGTase 催化翻译后将香叶基香叶基添加到 Rab GTP 酶的 C 末端半胱氨酸残基上。该基因的内含子区域存在三个小的核仁 RNA 基因。已经观察到该基因的交替剪接转录物变体。与该基因相关的假基因位于 3 号染色体上。[RefSeq 提供,2013 年 1 月]

This gene encodes the beta-subunit of the Enzyme Rab geranylgeranyl-transferase (RabGGTase), which belongs to the protein prenyltransferase family. RabGGTase catalyzes the post-translational addition of geranylgeranyl groups to C-terminal cysteine residues of Rab GTPases. Three small nucleolar RNA genes are present in the intronic regions of this gene. Alternately spliced transcript variants have been observed for this gene. A pseudogene associated with this gene is located on chromosome 3. [provided by RefSeq, Jan 2013]

RABGGTB 基因产物(1)

mRNA Protein Name
NM_004582.4 NP_004573.2 geranylgeranyl transferase type-2 subunit beta
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
12620389 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

RABGGTB 蛋白结构

SQHop_cyclase_N

SQHop_cyclase_N: Squalene-hopene cyclase N-terminal domain (73 - 182)

Prenyltrans

Prenyltrans: Prenyltransferase and squalene oxidase repeat (213 - 253)

Prenyltrans

Prenyltrans: Prenyltransferase and squalene oxidase repeat (258 - 302)

  • 0
  • 100
  • 200
  • 300
  • 331 a.a.
蛋白主名 其他名称

geranylgeranyl transferase type-2 subunit beta

GGTase-II-beta

RABGGTB 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra RABGGTB P53611 TAFA1 Homo sapiens Q7Z5A9
Validated Y2H
25416956
Intra RABGGTB P53611 TMEM25 Homo sapiens Q86YD3
Y2H Prey Pooling
25416956
Intra RABGGTB P53611 TMEM25 Homo sapiens Q86YD3
Y2H Array
25416956
Intra RABGGTB P53611 TMEM25 Homo sapiens Q86YD3
Validated Y2H
25416956
Intra RABGGTB P53611 B4GALT7 Homo sapiens Q9UBV7
Validated Y2H
32296183
Intra RABGGTB P53611 B4GALT7 Homo sapiens Q9UBV7
Y2H Array
25416956
Intra RABGGTB P53611 B4GALT7 Homo sapiens Q9UBV7
Y2H Prey Pooling
25416956
Intra RABGGTB P53611 ARAF Homo sapiens P10398
Y2H
12620389
Intra RABGGTB P53611 WDR4 Homo sapiens P57081
Validated Y2H
25416956
Intra RABGGTB P53611 WDR4 Homo sapiens P57081
Validated Y2H
32296183
Intra RABGGTB P53611 RABGGTA Homo sapiens Q92696
Validated Y2H
32296183
Intra RABGGTB P53611 RABGGTA Homo sapiens Q92696
Anti Tag CoIP
33961781
Intra RABGGTB P53611 RABGGTA Homo sapiens Q92696
Anti Tag CoIP
28514442
Intra RABGGTB P53611 RABGGTA Homo sapiens Q92696
Anti Tag CoIP
35271311
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Choroideremia

CHM

Tcd

Progressive Tapetochoroidal Dystrophy

Choroidal Sclerosis

Tapetochoroidal Dystrophy, Progressive

Progressive Choroidal Atrophy

Tapetochoroidal Dystrophy

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta RABGGTB VGNC VGNC:76641
Mus musculus RABGGTB MGD MGI:99537
Canis familiaris RABGGTB VGNC VGNC:45304
Felis catus RABGGTB VGNC VGNC:69208
Bos taurus RABGGTB VGNC VGNC:33671
Rattus norvegicus RABGGTB RGD RGD:3530