1. Gene
  2. APOBEC3A - apolipoprotein B mRNA editing enzyme catalytic subunit 3A Gene

APOBEC3A - apolipoprotein B mRNA editing enzyme catalytic subunit 3A Gene

中文名称:载脂蛋白 B mRNA 编辑酶催化亚基 3A

种属: Homo sapiens

同用名: A3A; ARP3; PHRBN; bK150C2.1

基因 ID: 200315 | 基因类型: protein coding

关于 APOBEC3A

Cytogenetic location: 22q13.1 Genomic coordinates (GRCh38): 22:38,957,609-38,963,184 (from NCBI)

This gene has 5 transcripts (splice variants), 1 gene allele, 26 orthologues and 9 paralogues. Biased expression in bone marrow (RPKM 38.8), appendix (RPKM 13.8) and 5 other tissues.

功能概要

该基因是胞苷脱氨酶基因家族的成员。它是在一个簇中发现的七个相关基因或假基因之一,被认为是由 22 号染色体上的基因复制引起的。该簇的成员编码的蛋白质在结构和功能上与 C 到 U RNA 编辑胞苷脱氨酶 APOBEC1 相关。该基因编码的蛋白质缺乏其他家族成员的锌结合活性。该蛋白质通过限制病毒等外源 DNA 的传播而在免疫中发挥作用。外源 DNA 限制的一种机制是外源双链 DNA 胞苷脱氨为尿苷,这会导致 DNA 降解。然而,也被认为涉及其他机制,因为抗病毒作用不依赖于脱氨酶活性。已发现该基因的两个转录本变体编码不同的亚型。[RefSeq 提供,2012 年 7 月]

This gene is a member of the cytidine deaminase gene family. It is one of seven related genes or pseudogenes found in a cluster, thought to result from gene duplication, on chromosome 22. Members of the cluster encode proteins that are structurally and functionally related to the C to U RNA-editing cytidine deaminase APOBEC1. The protein encoded by this gene lacks the zinc binding activity of Other family members. The protein plays a role in immunity, by restricting transmission of foreign DNA such as viruses. One mechanism of foreign DNA restriction is deamination of foreign double-stranded DNA cytidines to uridines, which leads to DNA degradation. However, Other mechanisms are also thought to be involved, as anti-viral effect is not dependent on deaminase activity. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2012]

APOBEC3A 基因产物(2)

mRNA Protein Name
NM_001270406.2 NP_001257335.1 DNA dC->dU-editing enzyme APOBEC-3A isoform b
NM_145699.4 NP_663745.1 DNA dC->dU-editing enzyme APOBEC-3A isoform a
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables cytidine deaminase activity IDA
IDA: 通过直接分析推断
16527742 GOA
enables cytidine deaminase activity IMP
IMP: 通过突变表型推断
20062055 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
22915799 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in clearance of foreign intracellular DNA IDA
IDA: 通过直接分析推断
20062055 GOA
involved in defense response to virus IDA
IDA: 通过直接分析推断
21123384 GOA
involved in innate immune response IDA
IDA: 通过直接分析推断
21123384 GOA
involved in negative regulation of viral genome replication IDA
IDA: 通过直接分析推断
16527742 GOA
involved in positive regulation of gene expression via chromosomal CpG island demethylation IDA
IDA: 通过直接分析推断
21496894 GOA
involved in retrotransposon silencing IDA
IDA: 通过直接分析推断
16527742 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
16527742 GOA
located in nucleus IDA
IDA: 通过直接分析推断
16527742 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

APOBEC3A 蛋白结构

APOBEC_C

APOBEC_C: APOBEC-like C-terminal domain (133 - 186)

  • 0
  • 100
  • 199 a.a.
蛋白主名 其他名称

DNA dC->dU-editing enzyme APOBEC-3A

apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A

重组 APOBEC3A 蛋白

目录号 产品名 蛋白编号 纯度
HY-P72080 APOBEC3A Protein, Human (His-SUMO) P31941-1 (M1-N199) ≥95%

关联疾病

疾病名称 别名
Colorectal Adenocarcinoma

Adenocarcinoma Of Large Intestine

Bone Leiomyosarcoma
Human T-Cell Leukemia Virus Type 1

Htlv-1

Human T Lymphotropic Virus Type 1

Plantar Wart

Verruca Plantaris

Verrucae On Sole Of Foot

Mosaic Plantar Warts

Epiphyseal Dysplasia, Multiple, 3

EDM3

Multiple Epiphyseal Dysplasia 3

Epiphyseal Dysplasia, Multiple, 3, With Or Without Myopathy

Multiple Epiphyseal Dysplasia 3 With Or Without Myopathy

Epiphyseal Dysplasia Multiple 3

Dysplasia, Epiphyseal, Multiple, Type 3

Psoriasis
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma