1. Gene
  2. Slc6a4 - solute carrier family 6 member 4 Gene

Slc6a4 - solute carrier family 6 member 4 Gene

中文名称:溶质载体家族 6 成员 4

种属: Rattus norvegicus

同用名: SERT

基因 ID: 25553 | 基因类型: protein coding

关于 Slc6a4

Primary_assembly 10: 61,826,123-61,858,384 forward strand.mRatBN7.2:CM026983.1

This gene has 1 transcript (splice variant), 205 orthologues, 20 paralogues and is associated with 54 phenotypes. Biased expression in Lung (RPKM 17.1), Adrenal (RPKM 71.6) and 4 other tissues.

功能概要

该基因编码的蛋白可启动多种功能,包括可卡因结合活动;血清素:钠同向转运体活性;和 syntaxin-1 结合活性。参与多个过程,包括细胞对 cGMP 的反应;细胞对视黄酸的反应;和多巴胺能突触传递的负调节。位于几种细胞成分中,包括膜筏;神经元投射;和突触。在血清素能突触中活跃。是突触后膜的组成部分和突触前膜的组成部分。用于研究焦虑症;精神抑郁症;和肺动脉高压。帕金森病和博尔纳病的生物标志物。该基因的人类直系同源基因与多种疾病有关,包括酒精使用障碍;述情障碍;焦虑症(多种);心脏病(多种);和精神抑郁症(多种)。与人类 SLC6A4(溶质载体家族 6 成员 4)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables several functions, including cocaine binding activity; serotonin:sodium symporter activity; and syntaxin-1 binding activity. Involved in several processes, including cellular response to cGMP; cellular response to retinoic acid; and negative regulation of dopaminergic synaptic transmission. Located in several cellular components, including membrane raft; neuron projection; and synapse. Is active in serotonergic synapse. Is integral component of postsynaptic membrane and integral component of presynaptic membrane. Used to study anxiety disorder; mental depression; and pulmonary hypertension. Biomarker of Parkinsonism and borna disease. Human ortholog(s) of this gene implicated in several diseases, including alcohol use disorder; alexithymia; anxiety disorder (multiple); heart disease (multiple); and mental depression (multiple). Orthologous to human SLC6A4 (solute carrier family 6 member 4). [provided by Alliance of Genome Resources, Apr 2022]

Slc6a4 基因产物(1)

mRNA Protein Name
NM_013034.4 NP_037166.2 sodium-dependent serotonin transporter
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables actin filament binding IDA
IDA: 通过直接分析推断
15627510 RGD
enables cocaine binding IMP
IMP: 通过突变表型推断
15994310 RGD
enables identical protein binding IPI
IPI: 通过物理相互作用推断
10716733 RGD
enables monoatomic cation channel activity IDA
IDA: 通过直接分析推断
8968583 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
16870614 RGD
enables serotonin:sodium:chloride symporter activity IDA
IDA: 通过直接分析推断
1944572 RGD
enables serotonin:sodium:chloride symporter activity IMP
IMP: 通过突变表型推断
8601815 RGD
enables syntaxin-1 binding IPI
IPI: 通过物理相互作用推断
11709063 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in behavioral response to cocaine IMP
IMP: 通过突变表型推断
18581099 RGD
involved in cellular response to cGMP IDA
IDA: 通过直接分析推断
17310063 RGD
involved in cellular response to retinoic acid IEP
IEP: 通过表达模式推断
17895527 RGD
involved in circadian rhythm IMP
IMP: 通过突变表型推断
18482738 RGD
involved in conditioned place preference IMP
IMP: 通过突变表型推断
18581099 RGD
involved in male mating behavior IMP
IMP: 通过突变表型推断
20704641 RGD
involved in membrane depolarization IDA
IDA: 通过直接分析推断
14642278 RGD
involved in memory IMP
IMP: 通过突变表型推断
20730799 RGD
involved in negative regulation of cerebellar granule cell precursor proliferation IMP
IMP: 通过突变表型推断
18573488 RGD
involved in negative regulation of neuron differentiation IMP
IMP: 通过突变表型推断
18573488 RGD
involved in negative regulation of synaptic transmission, dopaminergic IMP
IMP: 通过突变表型推断
20730799 RGD
involved in positive regulation of serotonin secretion IMP
IMP: 通过突变表型推断
25261262 RGD
involved in response to estradiol IEP
IEP: 通过表达模式推断
19168037 RGD
involved in response to hypoxia IEP
IEP: 通过表达模式推断
11259539 RGD
involved in response to nutrient IEP
IEP: 通过表达模式推断
21068163 RGD
involved in response to xenobiotic stimulus IEP
IEP: 通过表达模式推断
20501324 RGD
involved in serotonin transport IDA
IDA: 通过直接分析推断
11709063 RGD
involved in serotonin transport IMP
IMP: 通过突变表型推断
15994310 RGD
involved in serotonin uptake IDA
IDA: 通过直接分析推断
10716733 RGD
involved in vasoconstriction IMP
IMP: 通过突变表型推断
14605793 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in endomembrane system IDA
IDA: 通过直接分析推断
16870614 RGD
located in plasma membrane IDA
IDA: 通过直接分析推断
8601815 RGD
is active in postsynaptic membrane IDA
IDA: 通过直接分析推断
10460242 RGD
is active in presynaptic membrane IDA
IDA: 通过直接分析推断
10460242 RGD
is active in serotonergic synapse IDA
IDA: 通过直接分析推断
10460242 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Slc6a4 蛋白结构

5HT_transport_N

5HT_transport_N: pfam03491 (23 - 63)

SLC6sbd_SERT

SLC6sbd_SERT: cd11513 (78 - 614)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 630 a.a.
蛋白主名 其他名称

sodium-dependent serotonin transporter

5HT transporter

5HTT

Solute carrier family 6 (neurotransmitter transporter serotonin) member 4 (5-hydroxytryptamine (serotonin) transporter)

serotonin transporter

solute carrier family 6 (neurotransmitter transporter), member 4

solute carrier family 6 (neurotransmitter transporter, serotonin), member 4

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Slc6a4 NCBI NCBI:6532