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  2. Prkdc - protein kinase, DNA-activated, catalytic subunit Gene

Prkdc - protein kinase, DNA-activated, catalytic subunit Gene

中文名称:蛋白激酶,DNA 激活,催化亚基

种属: Rattus norvegicus

基因 ID: 360748 | 基因类型: protein coding

关于 Prkdc

Primary_assembly 11: 85,040,792-85,257,952 reverse strand.mRatBN7.2:CM026984.1

This gene has 3 transcripts (splice variants), 188 orthologues, 5 paralogues and is associated with 21 phenotypes. Biased expression in Thymus (RPKM 176.7), Spleen (RPKM 15.5) and 9 other tissues.

功能概要

预计该基因编码的蛋白具有多种功能,包括 DNA 依赖性蛋白激酶活性;酶结合活性;和核酸结合活性。参与多个过程,包括造血或淋巴器官发育;细胞衰老的负调节;和对伽马辐射反应的负调节。预测位于核仁和核质中。预计是几种细胞成分的一部分,包括 DNA 依赖性蛋白激酶-DNA 连接酶 4 复合物;蛋白质-DNA复合物;和小亚基加工体。预计活跃于核心。用于研究严重的联合免疫缺陷。该基因与免疫缺陷 26 相关的人类直向同源基因。与人类 PRKDC(蛋白激酶、DNA 激活、催化亚基)直向同源。 [由基因组资源联盟提供,2022 年 4 月]

Predicted to enable several functions, including DNA-dependent protein kinase activity; Enzyme binding activity; and nucleic acid binding activity. Involved in several processes, including hematopoietic or lymphoid organ development; negative regulation of cellular senescence; and negative regulation of response to gamma radiation. Predicted to be located in nucleolus and nucleoplasm. Predicted to be part of several cellular components, including DNA-dependent protein kinase-DNA Ligase 4 complex; protein-DNA complex; and small-subunit processome. Predicted to be active in nucleus. Used to study severe combined immunodeficiency. Human ortholog(s) of this gene implicated in immunodeficiency 26. Orthologous to human PRKDC (protein kinase, DNA-activated, catalytic subunit). [provided by Alliance of Genome Resources, Apr 2022]

Prkdc 基因产物(1)

mRNA Protein Name
NM_001108327.2 NP_001101797.2 DNA-dependent protein kinase catalytic subunit
基因本体论
  • 生物过程
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in negative regulation of cellular senescence IMP
IMP: 通过突变表型推断
22981234 RGD
involved in negative regulation of immunoglobulin production IMP
IMP: 通过突变表型推断
22981234 RGD
involved in negative regulation of response to gamma radiation IMP
IMP: 通过突变表型推断
22981234 RGD
involved in positive regulation of developmental growth IMP
IMP: 通过突变表型推断
22981234 RGD
involved in positive regulation of fibroblast proliferation IMP
IMP: 通过突变表型推断
22981234 RGD
involved in positive regulation of immune system process IMP
IMP: 通过突变表型推断
22981234 RGD
involved in response to activity IEP
IEP: 通过表达模式推断
21622964 RGD
involved in spleen development IMP
IMP: 通过突变表型推断
22981234 RGD
involved in thymus development IMP
IMP: 通过突变表型推断
22981234 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Prkdc 蛋白结构

NUC194

NUC194: pfam08163 (1812 - 2195)

DNAPKcs_CC5

DNAPKcs_CC5: pfam19704 (2206 - 2888)

FAT

FAT: pfam02259 (3086 - 3470)

TEL1

TEL1: cl34875 (3456 - 4012)

PIKKc_DNA-PK

PIKKc_DNA-PK: cd05172 (3716 - 4011)

FATC

FATC: pfam02260 (4095 - 4125)

  • 0
  • 700
  • 1400
  • 2100
  • 2800
  • 3500
  • 4126 a.a.
蛋白主名 其他名称

DNA-dependent protein kinase catalytic subunit

protein kinase, DNA activated, catalytic polypeptide

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Prkdc NCBI NCBI:5591