1. Gene
  2. SEH1L - SEH1 like nucleoporin Gene

SEH1L - SEH1 like nucleoporin Gene

中文名称:SEH1 样核孔蛋白

种属: Homo sapiens

同用名: Seh1; SEH1A; SEH1B; SEC13L

基因 ID: 81929 | 基因类型: protein coding

关于 SEH1L

Cytogenetic location: 18p11.21 Genomic coordinates (GRCh38): 18:12,948,011-12,987,536 (from NCBI)

This gene has 10 transcripts (splice variants), 218 orthologues and 1 paralogue. Ubiquitous expression in brain (RPKM 9.1), lymph node (RPKM 7.7) and 25 other tissues.

功能概要

该基因编码的蛋白质是核孔复合体 Nup107-160 的一部分。该蛋白质包含 WD 重复序列,与酵母 Seh1 具有 34% 的氨基酸同一性,与酵母 Sec13 具有 30% 的同一性。 Nup107-160 复合体的所有成分,包括这种蛋白质,在有丝分裂中专门定位于着丝粒。已经为该基因发现了编码不同亚型的两个可变剪接的转录物变体。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is part of a nuclear pore complex, Nup107-160. This protein contains WD repeats and shares 34% amino acid identity with yeast Seh1 and 30% identity with yeast Sec13. All constituents of the Nup107-160 complex, including this protein, specifically localize to kinetochores in mitosis. Two alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

SEH1L 基因产物(2)

mRNA Protein Name
NM_001013437.2 NP_001013455.1 nucleoporin SEH1 isoform 1
NM_031216.4 NP_112493.2 nucleoporin SEH1 isoform 2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
24315095 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in attachment of mitotic spindle microtubules to kinetochore IMP
IMP: 通过突变表型推断
17363900 GOA
involved in cellular response to amino acid starvation IMP
IMP: 通过突变表型推断
23723238 GOA
involved in cellular response to nutrient levels IDA
IDA: 通过直接分析推断
35831510 GOA
involved in mitotic metaphase chromosome alignment IMP
IMP: 通过突变表型推断
17363900 GOA
involved in nuclear pore organization IMP
IMP: 通过突变表型推断
15146057 GOA
involved in positive regulation of TORC1 signaling IDA
IDA: 通过直接分析推断
35831510 GOA
involved in positive regulation of TORC1 signaling IMP
IMP: 通过突变表型推断
25457612 GOA
involved in protein-containing complex localization IMP
IMP: 通过突变表型推断
23723238 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of GATOR2 complex IDA
IDA: 通过直接分析推断
35831510 GOA
colocalizes with kinetochore IDA
IDA: 通过直接分析推断
15146057 GOA
located in lysosomal membrane IDA
IDA: 通过直接分析推断
28199306 GOA
located in nuclear envelope IDA
IDA: 通过直接分析推断
24315095 GOA
part of nuclear pore outer ring IDA
IDA: 通过直接分析推断
17360435 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SEH1L 蛋白结构

WD40

WD40: WD domain, G-beta repeat (10 - 40)

WD40

WD40: WD domain, G-beta repeat (47 - 87)

WD40

WD40: WD domain, G-beta repeat (107 - 142)

WD40

WD40: WD domain, G-beta repeat (164 - 189)

WD40

WD40: WD domain, G-beta repeat (271 - 306)

  • 0
  • 100
  • 200
  • 300
  • 360 a.a.
蛋白主名 其他名称

nucleoporin SEH1

GATOR complex protein SEH1

SEH1L 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra SEH1L Q96EE3 SEC13 Homo sapiens P55735
Anti Tag CoIP
26496610
Intra SEH1L Q96EE3 SEC13 Homo sapiens P55735
BiFC
27194810
Intra SEH1L Q96EE3 NUP85 Homo sapiens Q9BW27
Anti Tag CoIP
26496610
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Nail Disorder, Nonsyndromic Congenital, 4

Anonychia Congenita

Anonychia

Hyponychia Congenita

NDNC4

Anonychia/Hyponychia Congenita

Nonsyndromic Congenital Nail Disorder 4

Isolated Congenital Anonychia

Anonychia Congenita Totalis

Anonychia Totalis

Autosomal Recessive Nonsyndromic Congenital Nail Disorder-4

Congenital Anonychia

Nonsyndromic Congenital Nail Disorder, 4

Absent Nails

Aplastic Nails

Congenital Absence Of Nails

Isolated Anonychia

Nail Disorder, Non-Syndromic Congenital, 4

Nail Disorder, Nonsyndromic, Congenital, Type 4

Nonsyndromic Congenital Nail Disorder

Nail Disorder, Nonsyndromic Congenital

Achalasia-Addisonianism-Alacrima Syndrome

Allgrove Syndrome

Triple-A Syndrome

Achalasia-Addisonianism-Alacrimia Syndrome

Alacrima-Achalasia-Adrenal Insufficiency Neurologic Disorder

Triple A Syndrome

Aaa Syndrome

AAAS

Glucocorticoid Deficiency With Achalasia

Glucocorticoid Deficiency And Achalasia

Addisonian-Achalasia Syndrome

Hypoadrenalism With Achalasia

Alacrima-Achalasia-Addisonianism

Aaa

Acth-Resistant Adrenal Insufficiency, Achalasia And Alacrima

Achalasia Addisonianism Alacrimia Syndrome

Achalasia Alacrima Syndrome

Addisonian Achalasia Syndrome

Achalasia-Addisonian Syndrome

Achalasia-Alacrima Syndrome

2a Syndrome

3a Syndrome

4a Syndrome

Adrenal Insufficiency-Achalasia-Alacrima Syndrome

Double A Syndrome

Quaternary A Syndrome

Acth-Resistant Adrenal Insufficiency With Achalasia And Alacrima

Allgrove'S Syndrome

Adrenal Gland Hypofunction

Adrenal Cortical Hypofunction

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus SEH1L RGD RGD:6490353
Felis catus SEH1L VGNC VGNC:64977
Bos taurus SEH1L VGNC VGNC:34420
Mus musculus SEH1L MGD MGI:1919374