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  2. CHD4 - chromodomain helicase DNA binding protein 4 Gene

CHD4 - chromodomain helicase DNA binding protein 4 Gene

中文名称:染色体解旋酶 DNA 结合蛋白 4

种属: Homo sapiens

同用名: CHD-4; Mi-2b; SIHIWES; Mi2-BETA

基因 ID: 1108 | 基因类型: protein coding

关于 CHD4

Cytogenetic location: 12p13.31 Genomic coordinates (GRCh38): 12:6,570,082-6,607,379 (from NCBI)

This gene has 54 transcripts (splice variants), 279 orthologues, 30 paralogues and is associated with 99 phenotypes. Ubiquitous expression in thyroid (RPKM 37.2), endometrium (RPKM 27.5) and 25 other tissues.

功能概要

该基因的产物属于 SNF2/RAD54 解旋酶家族。它是核小体重塑和脱乙酰酶复合物的主要成分,在表观遗传转录抑制中起重要作用。皮肌炎患者会产生针对这种蛋白质的抗体。该基因的体细胞突变与浆液性子宫内膜肿瘤有关。可变剪接导致编码不同异构体的多个转录变体。[RefSeq 提供,2014 年 7 月]

The product of this gene belongs to the SNF2/RAD54 helicase family. It represents the main component of the nucleosome remodeling and deacetylase complex and plays an important role in epigenetic transcriptional repression. Patients with dermatomyositis develop Antibodies against this protein. Somatic mutations in this gene are associated with serous endometrial tumors. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2014]

CHD4 基因产物(3)

mRNA Protein Name
NM_001273.5 NP_001264.2 chromodomain-helicase-DNA-binding protein 4 isoform 1
NM_001297553.2 NP_001284482.1 chromodomain-helicase-DNA-binding protein 4 isoform 2
NM_001363606.2 NP_001350535.1 chromodomain-helicase-DNA-binding protein 4 isoform 3
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables ATP hydrolysis activity IDA
IDA: 通过直接分析推断
28977666 GOA
enables ATP-dependent chromatin remodeler activity IDA
IDA: 通过直接分析推断
28977666 GOA
enables RNA polymerase II-specific DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
22926524 GOA
enables histone deacetylase binding IPI
IPI: 通过物理相互作用推断
27616479 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
9804427 GOA
enables transcription coregulator binding IPI
IPI: 通过物理相互作用推断
29795351 GOA
enables transcription corepressor activity IDA
IDA: 通过直接分析推断
33859416 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in chromatin remodeling IDA
IDA: 通过直接分析推断
9790534 GOA
involved in double-strand break repair via homologous recombination IMP
IMP: 通过突变表型推断
25593309 GOA
involved in negative regulation of gene expression IDA
IDA: 通过直接分析推断
33859416 GOA
involved in negative regulation of gene expression IGI
IGI: 通过遗传相互作用推断
33301730 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of NuRD complex IDA
IDA: 通过直接分析推断
19644445 GOA
part of RNA polymerase II transcription regulator complex IDA
IDA: 通过直接分析推断
29795351 GOA
located in centrosome IDA
IDA: 通过直接分析推断
17626165 GOA
located in chromosome, telomeric region IDA
IDA: 通过直接分析推断
25150861 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
17626165 GOA
located in nucleoplasm IDA
IDA: 通过直接分析推断
22720776 GOA
located in nucleus IDA
IDA: 通过直接分析推断
28977666 GOA
located in site of DNA damage IDA
IDA: 通过直接分析推断
25593309 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

CHD4 蛋白结构

CHDNT

CHDNT: CHDNT (NUC034) domain (163 - 217)

PHD

PHD: PHD-finger (372 - 416)

PHD

PHD: PHD-finger (451 - 495)

Chromo

Chromo: Chromo (CHRromatin Organisation MOdifier) domain (540 - 574)

Chromo

Chromo: Chromo (CHRromatin Organisation MOdifier) domain (624 - 670)

SNF2_N

SNF2_N: SNF2 family N-terminal domain (729 - 1025)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (1085 - 1164)

DUF1087

DUF1087: Domain of Unknown Function (DUF1087) (1290 - 1352)

DUF1086

DUF1086: Domain of Unknown Function (DUF1086) (1378 - 1522)

CHDCT2

CHDCT2: CHDCT2 (NUC038) domain (1724 - 1896)

  • 0
  • 300
  • 600
  • 900
  • 1200
  • 1500
  • 1800
  • 1912 a.a.
蛋白主名 其他名称

chromodomain-helicase-DNA-binding protein 4

ATP-dependent helicase CHD4

CHD4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
CHD4 Q14839 HDAC1 Homo sapiens Q13547 28977666
种属内
CHD4 Q14839 HDAC1 Homo sapiens Q13547 20693977
种属内
CHD4 Q14839 HDAC1 Homo sapiens Q13547 20693977
种属内
CHD4 Q14839 HDAC1 Homo sapiens Q13547 28977666
种属间: 跨种属相互作用 种属内: 同种属相互作用

CHD4 抗体

目录号 产品名 应用 反应物种
HY-P81265 CHD4 Antibody (YA946) WB, IP Human
HY-P81265A CHD4 Antibody (YA947) WB, ICC/IF, FC Human

关联疾病

疾病名称 别名
Sifrim-Hitz-Weiss Syndrome

SIHIWES

Sifrim-Hitz-Weiss Multiple Congenital Anomalies-Mental Retardation Syndrome

Dermatomyositis

Amyopathic Dermatomyositis

Dermatopolymyositis

Adult Dermatomyositis

Polymyositis With Skin Involvement

Adult Type Dermatomyositis

Petges-Clejat Syndrome

Hutchinson-Gilford Progeria Syndrome

Progeria

HGPS

Hutchinson-Gilford Syndrome

Hutchinson-Gilford Progeria

Hutchinson Gilford Syndrome

Hutchinson Gilford Progeria Syndrome

Hutchinson-Gilford Disease

Progeria Of Childhood

Hutchinson-Gilford-Progeria Syndrome

Uterine Carcinosarcoma

Carcinosarcoma Of The Corpus Uteri

Mixed Mullerian Sarcoma Of Uterus

Malignant Mixed Müllerian Tumor Of The Corpus Uteri

Malignant Mixed Müllerian Tumor Of Corpus Uteri

Mixed Müllerian Cancer Of Corpus Uteri

Malignant Mixed Mullerian Tumor Of The Corpus Uteri

Mixed Mullerian Cancer Of Corpus Uteri

Uterine Corpus Carcinosarcoma

Schizophrenia 8

SCZD8

Schizophrenia Susceptibility Locus, Chromosome 18-Related

Schizophrenia 8 With Or Without An Affective Disorder

Helsmoortel-Van Der Aa Syndrome

HVDAS

Mrd28

Adnp Syndrome

Adnp-Related Syndromic Intellectual Disability-Autism Spectrum Disorder

Mental Retardation, Autosomal Dominant 28

Adnp-Related Multiple Congenital Anomalies - Intellectual Disability - Autism Spectrum Disorder

Mental Retardation, Autosomal Dominant 28, Formerly

Mrd28, Formerly

Autosomal Dominant Mental Retardation 28

Adnp-Related Intellectual Disability And Autism Spectrum Disorder

Adnp-Related Multiple Congenital Anomalies-Intellectual Disability-Autism Spectrum Disorder

Uterine Corpus Endometrial Carcinoma
Cockayne Syndrome

Cockayne'S Syndrome

Dwarfism-Retinal Atrophy-Deafness Syndrome

Neill-Dingwall Syndrome

Progeria-Like Syndrome

Progeroid Nanism

Cs

Endometrial Serous Adenocarcinoma

Uterine Serous Carcinoma

Uterine Corpus Serous Adenocarcinoma

Uterine Papillary Serous Carcinoma

Charge Syndrome

Charge Association

Hall-Hittner Syndrome

Charge Association--Coloboma, Heart Anomaly, Choanal Atresia, Retardation, Genital And Ear Anomalies

Hhs

Coloboma, Heart Anomaly, Choanal Atresia, Restriction Of Growth And Development, Genital And Ear Anomalies

Coloboma-Heart Defects-Atresia Choanae-Retardation Of Growth And Development-Genitourinary Problems-Ear Abnormalities Syndrome

CHARGES

Adult Malignant Schwannoma

Adult Mpnst

Adult Neurofibrosarcoma

Rett Syndrome

Atypical Rett Syndrome

RTT

Rett Disorder

Rts

Autism, Dementia, Ataxia, And Loss Of Purposeful Hand Use

Rett Syndrome, Preserved Speech Variant

Rett Syndrome, Atypical

Rett'S Disorder

Rett Syndrome Variant

Autism-Dementia-Ataxia-Loss Of Purposeful Hand Use Syndrome

Cerebroatrophic Hyperammonemia

Rett Like Syndrome

Rett'S Syndrome

Atypical Rtt

Autism-Dementia-Ataxia-Loss Of Purposeful Hand Use

Rett Syndrome Preserved Speech Variant

Rett Syndrome Zappella Variant

Rett Syndrome, Zappella Variant

Uterine Corpus Cancer

Corpus Uteri Cancer

Malignant Uterine Corpus Neoplasm

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus CHD4 RGD RGD:620064
Macaca mulatta CHD4 VGNC VGNC:71029
Felis catus CHD4 VGNC VGNC:83529
Canis familiaris CHD4 VGNC VGNC:39202
Mus musculus CHD4 MGD MGI:1344380
Bos taurus CHD4 VGNC VGNC:27280