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  2. DDX19B - DEAD-box helicase 19B Gene

DDX19B - DEAD-box helicase 19B Gene

中文名称:死盒解旋酶 19B

种属: Homo sapiens

同用名: DBP5; RNAh; DDX19

基因 ID: 11269 | 基因类型: protein coding

关于 DDX19B

Cytogenetic location: 16q22.1 Genomic coordinates (GRCh38): 16:70,289,767-70,335,305 (from NCBI)

This gene has 16 transcripts (splice variants), 269 orthologues and 38 paralogues. Ubiquitous expression in testis (RPKM 16.5), thyroid (RPKM 10.7) and 25 other tissues.

功能概要

以保守基序 Asp-Glu-Ala-Asp (DEAD) 为特征的 DEAD 盒蛋白是推定的 RNA 解旋酶。它们涉及许多涉及 RNA 二级结构改变的细胞过程,例如翻译起始、核和线粒体剪接以及核糖体和剪接体组装。根据它们的分布模式,该家族的一些成员被认为参与了胚胎发生、精子发生以及细胞生长和分裂。该基因编码 DEAD box 蛋白,该蛋白具有 RNA 依赖性 ATP 酶和 ATP 依赖性 RNA 解旋活性。这种蛋白质被募集到核孔复合体的细胞质原纤维中,参与 mRNA 从细胞核的输出。已为该基因发现编码不同亚型的多个可变剪接转录物变体。[RefSeq 提供,2008 年 7 月]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein, which exhibits RNA-dependent ATPase and ATP-dependent RNA-unwinding activities. This protein is recruited to the cytoplasmic fibrils of the nuclear pore complex, where it participates in the export of mRNA from the nucleus. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

DDX19B 基因产物(8)

mRNA Protein Name
NM_001014449.3 NP_001014449.1 ATP-dependent RNA helicase DDX19B isoform 3
NM_001014451.3 NP_001014451.1 ATP-dependent RNA helicase DDX19B isoform 2
NM_001257172.2 NP_001244101.1 ATP-dependent RNA helicase DDX19B isoform 4
NM_001257173.2 NP_001244102.1 ATP-dependent RNA helicase DDX19B isoform 3
NM_001257174.2 NP_001244103.1 ATP-dependent RNA helicase DDX19B isoform 3
NM_001257175.2 NP_001244104.1 ATP-dependent RNA helicase DDX19B isoform 5
NM_001363938.1 NP_001350867.1 ATP-dependent RNA helicase DDX19B isoform 6
NM_007242.7 NP_009173.1 ATP-dependent RNA helicase DDX19B isoform 1
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
19208808 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

DDX19B 蛋白结构

DEAD

DEAD: DEAD/DEAH box helicase (117 - 281)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (352 - 434)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 479 a.a.
蛋白主名 其他名称

ATP-dependent RNA helicase DDX19B

ATP-dependent RNA helicase DDX19

DDX19B 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra DDX19B Q9UMR2 CTIF Homo sapiens O43310-2
Y2H Prey Pooling
32296183
Intra DDX19B Q9UMR2 CTIF Homo sapiens O43310-2
Y2H Array
32296183
Intra DDX19B Q9UMR2 TGFBR2 Homo sapiens P37173
Y2H Array
32814053
Intra DDX19B Q9UMR2 TGFBR2 Homo sapiens P37173
Validated Y2H
32814053
Intra DDX19B Q9UMR2 TGFBR2 Homo sapiens P37173
Y2H Pooling
32814053
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6
Anti Tag CoIP
23804756
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6
Y2H Array
31515488
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6
Anti Tag CoIP
33961781
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6
ITC
23804756
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6
Anti Bait CoIP
23804756
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6
Pull Down
23804756
Intra DDX19B Q9UMR2 TERF1 Homo sapiens P54274
Pull Down
21044950
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6-2
Y2H Prey Pooling
32296183
Intra DDX19B Q9UMR2 MIF4GD Homo sapiens A9UHW6-2
Y2H Array
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Lethal Congenital Contracture Syndrome 1

LCCS1

Multiple Contracture Syndrome, Finnish Type

Lccs

Lethal Autosomal Recessive Syndrome Of Multiple Congenital Contractures

Lethal Congenital Contracture Syndrome Type 1

Herva Disease

Multiple Contracture Syndrome Finnish Type

Contracture Syndrome, Lethal, Congenital, Type 1

Anterior Horn Cell Disease
Lethal Congenital Contracture Syndrome

Lccs

Lethal Congenital Contracture Syndrome 1

Spinocerebellar Ataxia, Autosomal Recessive, With Axonal Neuropathy 2

Aoa2

Ataxia With Oculomotor Apraxia Type 2

Scar1

SCAN2

Ataxia-Oculomotor Apraxia 2

Ataxia-Ocular Apraxia 2

Ataxia-Oculomotor Apraxia Type 2

Scan 2

Spinocerebellar Ataxia With Axonal Neuropathy Type 2

Spinocerebellar Ataxia, Autosomal Recessive 1, Formerly

Scar1, Formerly

Autosomal Recessive Spinocerebellar Ataxia-1

Spinocerebellar Ataxia, Autosomal Recessive, 1

Ataxia-Ocular Apraxia-2

Spinocerebellar Ataxia, Autosomal Recessive 1

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus DDX19B MGD MGI:2148251
Rattus norvegicus DDX19B RGD RGD:1593382