1. Gene
  2. Slc6a4 - solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 Gene

Slc6a4 - solute carrier family 6 (neurotransmitter transporter, serotonin), member 4 Gene

中文名称:溶质载体家族 6 (神经递质转运蛋白,血清素) ,成员 4

种属: Mus musculus

同用名: Htt; Sert; 5-HTT

基因 ID: 15567 | 基因类型: protein coding

关于 Slc6a4

Chromosome 11: 76,889,429-76,923,166 forward strand.GRCm39:CM001004.3

This gene has 4 transcripts (splice variants), 205 orthologues, 20 paralogues and is associated with 59 phenotypes. Broad expression in large intestine adult (RPKM 24.9), small intestine adult (RPKM 15.4) and 16 other tissues.

功能概要

该基因编码的蛋白可启动单胺跨膜转运蛋白活性;神经递质跨膜转运体活性;和一氧化氮合酶结合活性。涉及多个过程,包括大脑形态发生;血清素摄取;和社会行为。在对有机物质的细胞反应上游或细胞反应中起作用。位于粘着斑和突触。以多种结构表达,包括早期孕体;肝;神经系统;子房;和极体。用于研究自闭症谱系障碍和婴儿猝死综合症。该基因的人类直系同源基因与多种疾病有关,包括酒精使用障碍;述情障碍;焦虑症(多种);心脏病(多种);和精神抑郁症(多种)。与人类 SLC6A4(溶质载体家族 6 成员 4)同源。 [由基因组资源联盟提供,2022 年 4 月]

Enables monoamine transmembrane transporter activity; neurotransmitter transmembrane transporter activity; and nitric-oxide synthase binding activity. Involved in several processes, including brain morphogenesis; serotonin uptake; and social behavior. Acts upstream of or within cellular response to organic substance. Located in focal adhesion and synapse. Is expressed in several structures, including early conceptus; liver; nervous system; ovary; and polar body. Used to study autism spectrum disorder and sudden infant death syndrome. Human ortholog(s) of this gene implicated in several diseases, including alcohol use disorder; alexithymia; anxiety disorder (multiple); heart disease (multiple); and mental depression (multiple). Orthologous to human SLC6A4 (solute carrier family 6 member 4). [provided by Alliance of Genome Resources, Apr 2022]

Slc6a4 基因产物(1)

mRNA Protein Name
NM_010484.2 NP_034614.2 sodium-dependent serotonin transporter
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables monoamine transmembrane transporter activity IMP
IMP: 通过突变表型推断
20858707 MGI
enables neurotransmitter transmembrane transporter activity IMP
IMP: 通过突变表型推断
20858707 MGI
enables nitric-oxide synthase binding IPI
IPI: 通过物理相互作用推断
17452640 MGI
enables protein binding IPI
IPI: 通过物理相互作用推断
17452640 MGI
enables serotonin:sodium:chloride symporter activity IDA
IDA: 通过直接分析推断
9037532 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in brain morphogenesis IMP
IMP: 通过突变表型推断
19208814 MGI
involved in enteric nervous system development IMP
IMP: 通过突变表型推断
27111230 MGI
involved in negative regulation of organ growth IMP
IMP: 通过突变表型推断
19208814 MGI
involved in neurotransmitter reuptake IDA
IDA: 通过直接分析推断
9037532 MGI
involved in neurotransmitter reuptake IMP
IMP: 通过突变表型推断
9037532 MGI
involved in neurotransmitter transport IMP
IMP: 通过突变表型推断
20858707 MGI
involved in platelet aggregation IMP
IMP: 通过突变表型推断
18317590 MGI
involved in positive regulation of cell cycle IMP
IMP: 通过突变表型推断
19308295 MGI
involved in positive regulation of gene expression IMP
IMP: 通过突变表型推断
19308295 MGI
involved in serotonin transport IMP
IMP: 通过突变表型推断
19308295 MGI
involved in serotonin uptake IDA
IDA: 通过直接分析推断
17452640 MGI
involved in serotonin uptake IMP
IMP: 通过突变表型推断
9547354 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in focal adhesion IDA
IDA: 通过直接分析推断
29038237 MGI
located in synapse IDA
IDA: 通过直接分析推断
29038237 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Slc6a4 蛋白结构

5HT_transport_N

5HT_transport_N: pfam03491 (23 - 63)

SLC6sbd_SERT

SLC6sbd_SERT: cd11513 (78 - 614)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 630 a.a.
蛋白主名 其他名称

sodium-dependent serotonin transporter

5-hydroxytryptamine (serotonin) transporter

5HT transporter

5HTT

Sodium-dependent serotonin transporter (5HT transporter) (5HTT)

solute carrier family 6 member 4

Slc6a4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
Slc6a4 Q60857 Nos1 Mus musculus Q9Z0J4
Pull Down
17452640
种属内
Slc6a4 Q60857 Nos1 Mus musculus Q9Z0J4
Anti Tag CoIP
17452640
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Slc6a4 NCBI NCBI:6532