1. Gene
  2. PLEKHM2 - pleckstrin homology and RUN domain containing M2 Gene

PLEKHM2 - pleckstrin homology and RUN domain containing M2 Gene

中文名称:含 pleckstrin 同源性和 RUN 结构域 M2

种属: Homo sapiens

同用名: SKIP

基因 ID: 23207 | 基因类型: protein coding

关于 PLEKHM2

Cytogenetic location: 1p36.21 Genomic coordinates (GRCh38): 1:15,681,506-15,734,769 (from NCBI)

This gene has 5 transcripts (splice variants), 207 orthologues, 13 paralogues and is associated with 1 phenotype. Ubiquitous expression in bone marrow (RPKM 21.8), testis (RPKM 21.5) and 25 other tissues.

功能概要

该基因编码一种蛋白质,该蛋白质结合加端定向微管运动蛋白驱动蛋白以及溶酶体 GTP 酶 Arl8,并且是溶酶体从微管组织中心分布出去所必需的。编码的蛋白质属于调节溶酶体定位的多亚基 BLOC-one 相关复合物。它结合一种称为沙门氏菌诱导丝 A 的沙门氏菌效应蛋白,是沙门氏菌发病机制中的关键宿主决定因素。它具有一个结构域结构,由一个 N 端 RPIP8、UNC-14 和 NESCA (RUN) 结构域组成,结合驱动蛋白 1 和溶酶体 GTP 酶 Arl8,以及一个 C 端 pleckstrin 同源结构域,结合沙门氏菌诱导的细丝一种效应蛋白。该基因中自然发生的突变会导致溶酶体异常定位、自噬通量受损,并与隐性扩张型心肌病和左心室致密化不全相关。[RefSeq 提供,2017 年 2 月]

This gene encodes a protein that binds the plus-end directed microtubule motor protein Kinesin, together with the lysosomal GTPase Arl8, and is required for lysosomes to distribute away from the microtubule-organizing center. The encoded protein belongs to the multisubunit BLOC-one-related complex that regulates lysosome positioning. It binds a Salmonella effector protein called Salmonella induced filament A and is a critical host determinant in Salmonella pathogenesis. It has a domain architecture consisting of an N-terminal RPIP8, UNC-14, and NESCA (RUN) domain that binds kinesin-1 as well as the lysosomal GTPase Arl8, and a C-terminal pleckstrin homology domain that binds the Salmonella induced filament A effector protein. Naturally occurring mutations in this gene lead to abnormal localization of lysosomes, impaired Autophagy flux and are associated with recessive dilated cardiomyopathy and left ventricular noncompaction. [provided by RefSeq, Feb 2017]

PLEKHM2 基因产物(2)

mRNA Protein Name
NM_001410755.1 NP_001397684.1 pleckstrin homology domain-containing family M member 2 isoform 2
NM_015164.4 NP_055979.2 pleckstrin homology domain-containing family M member 2 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables kinesin binding IDA
IDA: 通过直接分析推断
15905402 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
15905402 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in Golgi organization IMP
IMP: 通过突变表型推断
15905402 GOA
involved in lysosome localization IDA
IDA: 通过直接分析推断
28325809 GOA
involved in lysosome localization IMP
IMP: 通过突变表型推断
22172677 GOA
involved in natural killer cell mediated cytotoxicity IMP
IMP: 通过突变表型推断
24088571 GOA
involved in regulation of protein localization IMP
IMP: 通过突变表型推断
18787122 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in endosome membrane IDA
IDA: 通过直接分析推断
18996344 GOA
located in lysosomal membrane IDA
IDA: 通过直接分析推断
22172677 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

PLEKHM2 蛋白结构

RUN

RUN: RUN domain (45 - 157)

PH

PH: PH domain (773 - 873)

  • 0
  • 200
  • 400
  • 600
  • 800
  • 1019 a.a.
蛋白主名 其他名称

pleckstrin homology domain-containing family M member 2

PH domain-containing family M member 2

PLEKHM2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属间
PLEKHM2 Q8IWE5 sifA Salmonella typhimurium Q56061 18996344
种属间
PLEKHM2 Q8IWE5 sifA Salmonella typhimurium Q56061 18787122
种属内
PLEKHM2 Q8IWE5 RAB9A Homo sapiens P51151 18787122
种属间
PLEKHM2 Q8IWE5 Klc2 Mus musculus Q91YS4
FPS
23519214
种属间
PLEKHM2 Q8IWE5 Klc2 Mus musculus Q91YS4 23519214
种属间
PLEKHM2 Q8IWE5 sifA Salmonella typhimurium A0A0F6B063 18996344
种属间
PLEKHM2 Q8IWE5 sifA Salmonella typhimurium A0A0F6B063
ITC
18996344
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Left Ventricular Noncompaction

Noncompaction Cardiomyopathy

Left Ventricular Hypertrabeculation

Lvnc

Spongy Myocardium

Isolated Noncompaction Of The Ventricular Myocardium

Left Ventricular Myocardial Noncompaction Cardiomyopathy

Fetal Myocardium

Honeycomb Myocardium

Hypertrabeculation Syndrome

Left Ventricular Non-Compaction

Lvht

Non-Compaction Of The Left Ventricular Myocardium

Ventricular Noncompaction, Left

Non-Compaction Cardiomyopathy

Dilated Cardiomyopathy

Familial Dilated Cardiomyopathy

Primary Dilated Cardiomyopathy

Idiopathic Dilated Cardiomyopathy

Congestive Cardiomyopathy

Idiopathic Dilation Cardiomyopathy

Primary Familial Dilated Cardiomyopathy

Cardiomyopathy, Dilated

DCM

Cardiomyopathy, Familial Dilated

Dilated Cardiomyopathy, Familial

Hypokinetic Dilated Cardiomyopathy, Familial

Familial Idiopathic Cardiomyopathy

Fdc

Cardiomyopathy, Familial Idiopathic

Idiopathic Cardiomegaly

Dilated Congestive Cardiomyopathy

Chronic Dilated Cardiomyopathy

Ccm - [Congestive Cardiomyopathy]

Cocm - [Congestive Cardiomyopathy]

Dcm - [Dilated Cardiomyopathy]

Dilated-Hypokinetic Cardiomyopathy

Congestive Idiopathic Cardiomyopathy

Primary Idiopathic Dilated Cardiomyopathy

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris PLEKHM2 VGNC VGNC:44684
Macaca mulatta PLEKHM2 VGNC VGNC:76131
Bos taurus PLEKHM2 VGNC VGNC:33024
Felis catus PLEKHM2 VGNC VGNC:64236
Mus musculus PLEKHM2 MGD MGI:1916832
Rattus norvegicus PLEKHM2 RGD RGD:1307005