1. Gene
  2. SMC6 - structural maintenance of chromosomes 6 Gene

SMC6 - structural maintenance of chromosomes 6 Gene

中文名称:6 号染色体的结构维护

种属: Homo sapiens

同用名: SMC-6; hSMC6; SMC6L1

基因 ID: 79677 | 基因类型: protein coding

关于 SMC6

Cytogenetic location: 2p24.2 Genomic coordinates (GRCh38): 2:17,663,812-17,753,810 (from NCBI)

This gene has 10 transcripts (splice variants), 218 orthologues and 1 paralogue. Broad expression in testis (RPKM 13.9), lymph node (RPKM 7.0) and 24 other tissues.

功能概要

启用泛素蛋白连接酶结合活性。参与多个过程,包括细胞衰老;染色体分离的正调控;以及通过重组维持端粒。位于染色体和核体中。 Smc5-Smc6 复合体的一部分。 [由基因组资源联盟提供,2022 年 4 月]

Enables ubiquitin protein Ligase binding activity. Involved in several processes, including cellular senescence; positive regulation of chromosome segregation; and telomere maintenance via recombination. Located in chromosome and nuclear body. Part of Smc5-Smc6 complex. [provided by Alliance of Genome Resources, Apr 2022]

SMC6 基因产物(2)

mRNA Protein Name
NM_001142286.2 NP_001135758.1 structural maintenance of chromosomes protein 6
NM_024624.6 NP_078900.1 structural maintenance of chromosomes protein 6
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA secondary structure binding IDA
IDA: 通过直接分析推断
28095508 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
11408570 GOA
enables ubiquitin protein ligase binding IPI
IPI: 通过物理相互作用推断
25931565 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in DNA damage response IDA
IDA: 通过直接分析推断
11408570 GOA
involved in cellular senescence IMP
IMP: 通过突变表型推断
17589526 GOA
involved in negative regulation by host of viral genome replication IDA
IDA: 通过直接分析推断
28095508 GOA
involved in positive regulation of chromosome segregation IMP
IMP: 通过突变表型推断
25931565 GOA
involved in telomere maintenance via recombination IMP
IMP: 通过突变表型推断
17589526 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in PML body IDA
IDA: 通过直接分析推断
17589526 GOA
part of Smc5-Smc6 complex IDA
IDA: 通过直接分析推断
18086888 GOA
located in chromosome, telomeric region IDA
IDA: 通过直接分析推断
17589526 GOA
located in interchromatin granule IDA
IDA: 通过直接分析推断
11408570 GOA
is active in nucleus IDA
IDA: 通过直接分析推断
28095508 GOA
located in nucleus IDA
IDA: 通过直接分析推断
11408570 GOA
located in site of double-strand break IDA
IDA: 通过直接分析推断
25931565 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SMC6 蛋白结构

SMC_N

SMC_N: RecF/RecN/SMC N terminal domain (48 - 1065)

  • 0
  • 200
  • 400
  • 600
  • 800
  • 1000
  • 1091 a.a.
蛋白主名 其他名称

structural maintenance of chromosomes protein 6

SMC protein 6

SMC6 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SMC6 Q96SB8 NSMCE3 Homo sapiens Q96MG7 18086888
种属内
SMC6 Q96SB8 NSMCE3 Homo sapiens Q96MG7 27427983
种属内
SMC6 Q96SB8 NSMCE3 Homo sapiens Q96MG7 26496610
种属内
SMC6 Q96SB8 NSMCE1 Homo sapiens Q8WV22 18086888
种属内
SMC6 Q96SB8 NSMCE1 Homo sapiens Q8WV22 26496610
种属内
SMC6 Q96SB8 NSMCE2 Homo sapiens Q96MF7 33961781
种属内
SMC6 Q96SB8 NSMCE2 Homo sapiens Q96MF7 18086888
种属内
SMC6 Q96SB8 NSMCE2 Homo sapiens Q96MF7 26496610
种属内
SMC6 Q96SB8 SLF2 Homo sapiens Q8IX21 32389690
种属内
SMC6 Q96SB8 SLF2 Homo sapiens Q8IX21 32389690
种属内
SMC6 Q96SB8 SLF2 Homo sapiens Q8IX21 26496610
种属内
SMC6 Q96SB8 SMC5 Homo sapiens Q8IY18 33961781
种属内
SMC6 Q96SB8 SMC5 Homo sapiens Q8IY18 26496610
种属内
SMC6 Q96SB8 SMC5 Homo sapiens Q8IY18 18086888
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Malignant Breast Melanoma

Malignant Melanoma Of Breast

Breast Melanoma

Fanconi Anemia, Complementation Group F

Fanconi Anemia Complementation Group F

FANCF

Cornelia De Lange Syndrome

De Lange Syndrome

Brachmann De Lange Syndrome

Brachmann-De Lange Syndrome

Cdls

Bdls

Typus Degenerativus Amstelodamensis

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus SMC6 MGD MGI:1914491
Rattus norvegicus SMC6 RGD RGD:1311214
Bos taurus SMC6 VGNC VGNC:35003
Canis familiaris SMC6 VGNC VGNC:46547
Felis catus SMC6 VGNC VGNC:65480
Macaca mulatta SMC6 VGNC VGNC:77746