1. Academic Validation
  2. A clinically compatible drug-screening platform based on organotypic cultures identifies vulnerabilities to prevent and treat brain metastasis

A clinically compatible drug-screening platform based on organotypic cultures identifies vulnerabilities to prevent and treat brain metastasis

  • EMBO Mol Med. 2022 Mar 7;14(3):e14552. doi: 10.15252/emmm.202114552.
Lucía Zhu 1 Diana Retana 1 Pedro García-Gómez 1 Laura Álvaro-Espinosa 1 Neibla Priego 1 Mariam Masmudi-Martín 1 Natalia Yebra 1 Lauritz Miarka 1 Elena Hernández-Encinas 2 Carmen Blanco-Aparicio 2 Sonia Martínez 2 Cecilia Sobrino 3 Nuria Ajenjo 3 Maria-Jesus Artiga 3 Eva Ortega-Paino 3 Raúl Torres-Ruiz 4 5 Sandra Rodríguez-Perales 4 RENACER  Riccardo Soffietti 6 Luca Bertero 7 Paola Cassoni 7 Tobias Weiss 8 Javier Muñoz 9 Juan Manuel Sepúlveda 10 Pedro González-León 11 Luis Jiménez-Roldán 11 12 13 Luis Miguel Moreno 11 Olga Esteban 11 Ángel Pérez-Núñez 11 12 14 Aurelio Hernández-Laín 13 Oscar Toldos 13 Yolanda Ruano 15 16 Lucía Alcázar 17 Guillermo Blasco 17 José Fernández-Alén 17 Eduardo Caleiras 18 Miguel Lafarga 19 Diego Megías 20 Osvaldo Graña-Castro 21 Carolina Nör 22 Michael D Taylor 22 Leonie S Young 23 Damir Varešlija 23 Nicola Cosgrove 23 Fergus J Couch 24 Lorena Cussó 25 26 27 28 Manuel Desco 25 26 27 28 Silvana Mouron 29 Miguel Quintela-Fandino 29 Michael Weller 8 Joaquín Pastor 2 Manuel Valiente 1
Affiliations

Affiliations

  • 1 Brain Metastasis Group, CNIO, Madrid, Spain.
  • 2 Experimental Therapeutics Programme, CNIO, Madrid, Spain.
  • 3 Biobank, CNIO, Madrid, Spain.
  • 4 Molecular Cytogenetics Unit, CNIO, Madrid, Spain.
  • 5 Division of Hematopoietic Innovative Therapies, Centro de Investigaciones Energeticas, Medioambientales y Tecnologicas (CIEMAT), Madrid, Spain.
  • 6 Department of Neuro-Oncology, University and City of Health and Science Hospital, Turin, Italy.
  • 7 Department of Medical Sciences, University of Turin, Turin, Italy.
  • 8 Department of Neurology, Clinical Neuroscience Center, University Hospital Zurich and University of Zurich, Zurich, Switzerland.
  • 9 Proteomics Unit, ProteoRedISCIII, CNIO, Madrid, Spain.
  • 10 Neuro-Oncology Unit, Hospital Universitario 12 de Octubre, Madrid, Spain.
  • 11 Neurosurgery Unit, Hospital Universitario 12 de Octubre, Madrid, Spain.
  • 12 Department of Surgery, Universidad Complutense de Madrid, Madrid, Spain.
  • 13 Neuropathology Unit, Instituto i+12, Hospital Universitario 12 de Octubre, Madrid, Spain.
  • 14 Neuro-Oncology Group, Research Institute Hospital 12 de Octubre (i+12), Madrid, Spain.
  • 15 Pathology Department, Instituto i+12, Hospital Universitario 12 de Octubre, Madrid, Spain.
  • 16 Universidad Francisco de Vitoria, Madrid, Spain.
  • 17 Neurosurgery Department, Hospital Universitario de La Princesa, Madrid, Spain.
  • 18 Histopathology Unit, CNIO, Madrid, Spain.
  • 19 Department of Anatomy and Cell Biology and Centro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), University of Cantabria-IDIVAL, Santander, Spain.
  • 20 Confocal Microscopy Unit, CNIO, Madrid, Spain.
  • 21 Bioinformatics Unit, CNIO, Madrid, Spain.
  • 22 Developmental and Stem Cell Biology Program and The Arthur and Sonia Labatt Brain Tumour Research Centre, The Hospital for Sick Children, Toronto, ON, Canada.
  • 23 Endocrine Oncology Research Group, Department of Surgery, RCSI University of Medicine and Health Sciences, Dublin, Ireland.
  • 24 Department of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, USA.
  • 25 Departamento de Bioingeniería e Ingeniería Aeroespacial, Universidad Carlos III de Madrid, Madrid, Spain.
  • 26 Instituto de Investigación Sanitaria Gregorio Marañón, Madrid, Spain.
  • 27 Centro de Investigación Biomédica en Red de Salud Mental (CIBERSAM), Madrid, Spain.
  • 28 Unidad de Imagen Avanzada, Centro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain.
  • 29 Breast Cancer Clinical Research Unit, CNIO, Madrid, Spain.
Abstract

We report a medium-throughput drug-screening platform (METPlatform) based on organotypic cultures that allows to evaluate inhibitors against metastases growing in situ. By applying this approach to the unmet clinical need of brain metastasis, we identified several vulnerabilities. Among them, a blood-brain barrier permeable HSP90 Inhibitor showed high potency against mouse and human brain metastases at clinically relevant stages of the disease, including a novel model of local relapse after neurosurgery. Furthermore, in situ proteomic analysis applied to metastases treated with the chaperone inhibitor uncovered a novel molecular program in brain metastasis, which includes biomarkers of poor prognosis and actionable mechanisms of resistance. Our work validates METPlatform as a potent resource for metastasis research integrating drug-screening and unbiased omic approaches that is compatible with human samples. Thus, this clinically relevant strategy is aimed to personalize the management of metastatic disease in the brain and elsewhere.

Keywords

drug-screen; metastasis; organotypic cultures; patient-derived; resistance.

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