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  2. Casp4 - caspase 4, apoptosis-related cysteine peptidase Gene

Casp4 - caspase 4, apoptosis-related cysteine peptidase Gene

中文名称:半胱天冬酶 4,细胞凋亡相关的半胱氨酸肽酶

种属: Mus musculus

同用名: Caspl; ich-3; CASP-4; Casp11; CASP-11

基因 ID: 12363 | 基因类型: protein coding

关于 Casp4

Chromosome 9: 5,308,828-5,336,783 forward strand.GRCm39:CM001002.3

This gene has 7 transcripts (splice variants), 252 orthologues, 11 paralogues and is associated with 21 phenotypes. Biased expression in large intestine adult (RPKM 7.7), bladder adult (RPKM 4.) and 14 other tissues.

功能概要

该基因编码在细胞凋亡、细胞迁移和炎症反应中起重要作用的半胱氨酸蛋白酶成员。编码的蛋白质介导巨噬细胞在细菌感染后产生促炎细胞因子。缺乏编码蛋白的小鼠对脂多糖诱导的内毒素休克有抵抗力。已经描述了包含剪接受体连接的 5-bp 缺失,导致某些小鼠品系中的交替剪接和较短的非功能性亚型。尽管其官方命名为“caspase 4,细胞凋亡相关的半胱氨酸肽酶”,但该基因及其编码的蛋白质在历史上被称为 Caspase 11。该基因存在于 9 号染色体上的三个 Caspase 基因簇中。[RefSeq 提供,4 月2015]

This gene encodes a member of the cysteine proteases that plays important roles in Apoptosis, cell migration and the inflammatory response. The encoded protein mediates production of pro-inflammatory cytokines by macrophages upon Bacterial infection. Mice lacking the encoded protein are resistant to endotoxic shock induced by lipopolysaccharide. A 5-bp deletion encompassing a splice acceptor junction resulting in alternate splicing and a shorter non-functional isoform in certain mouse strains has been described. Although its official nomenclature is "caspase 4, apoptosis-related cysteine peptidase", this gene and its encoded protein have historically been called Caspase 11. This gene is present in a cluster of three Caspase genes on chromosome 9. [provided by RefSeq, Apr 2015]

Casp4 基因产物(8)

mRNA Protein Name
NM_001379320.1 NP_001366249.1 caspase-4 isoform 4
NM_001379318.1 NP_001366247.1 caspase-4 isoform 2
NM_001379319.1 NP_001366248.1 caspase-4 isoform 3
NM_001379321.1 NP_001366250.1 caspase-4 isoform 5
NM_001379323.1 NP_001366252.1 caspase-4 isoform 7
NM_007609.3 NP_031635.2 caspase-4 isoform 1
NM_001379322.1 NP_001366251.1 caspase-4 isoform 6
NM_001379321.1 NP_001366250.1 caspase-4 isoform 5
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables cysteine-type endopeptidase activity IDA
IDA: 通过直接分析推断
30135078 MGI
enables cysteine-type endopeptidase activity IMP
IMP: 通过突变表型推断
30392956 MGI
enables lipid binding IDA
IDA: 通过直接分析推断
25119034 MGI
enables lipopolysaccharide binding IDA
IDA: 通过直接分析推断
25119034 MGI
enables protein binding IPI
IPI: 通过物理相互作用推断
30692621 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in defense response to Gram-positive bacterium IDA
IDA: 通过直接分析推断
30392956 MGI
involved in defense response to bacterium IDA
IDA: 通过直接分析推断
25119034 MGI
involved in defense response to bacterium IMP
IMP: 通过突变表型推断
23348507 MGI
involved in detection of lipopolysaccharide IDA
IDA: 通过直接分析推断
23887873 MGI
acts upstream of or within ectopic germ cell programmed cell death IGI
IGI: 通过遗传相互作用推断
11536012 MGI
acts upstream of or within ectopic germ cell programmed cell death IMP
IMP: 通过突变表型推断
11536012 MGI
acts upstream of interleukin-1 beta production IGI
IGI: 通过遗传相互作用推断
22002608 MGI
acts upstream of macrophage cytokine production IGI
IGI: 通过遗传相互作用推断
22002608 MGI
involved in non-canonical inflammasome complex assembly IDA
IDA: 通过直接分析推断
23887873 MGI
involved in non-canonical inflammasome complex assembly IMP
IMP: 通过突变表型推断
22895188 MGI
involved in positive regulation of NLRP3 inflammasome complex assembly IDA
IDA: 通过直接分析推断
26173909 MGI
involved in positive regulation of inflammatory response IDA
IDA: 通过直接分析推断
30392956 MGI
involved in positive regulation of inflammatory response IMP
IMP: 通过突变表型推断
23348507 MGI
acts upstream of or within positive regulation of interleukin-1 beta production IGI
IGI: 通过遗传相互作用推断
22002608 MGI
involved in positive regulation of interleukin-18-mediated signaling pathway IDA
IDA: 通过直接分析推断
30392956 MGI
acts upstream of or within positive regulation of macrophage cytokine production IGI
IGI: 通过遗传相互作用推断
22002608 MGI
involved in protein autoprocessing IDA
IDA: 通过直接分析推断
32109412 MGI
involved in protein autoprocessing IMP
IMP: 通过突变表型推断
30392956 MGI
involved in protein maturation IDA
IDA: 通过直接分析推断
30135078 MGI
involved in pyroptotic cell death IDA
IDA: 通过直接分析推断
38632402 MGI
involved in pyroptotic inflammatory response IDA
IDA: 通过直接分析推断
30135078 MGI
acts upstream of or within pyroptotic inflammatory response IMP
IMP: 通过突变表型推断
22002608 MGI
involved in pyroptotic inflammatory response IMP
IMP: 通过突变表型推断
23348507 MGI
involved in regulation of inflammatory response IDA
IDA: 通过直接分析推断
32109412 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
is active in cytoplasm IDA
IDA: 通过直接分析推断
16670335 MGI
is active in cytosol IDA
IDA: 通过直接分析推断
16670335 MGI
part of non-canonical inflammasome complex IDA
IDA: 通过直接分析推断
23887873 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Casp4 蛋白结构

CARD_CASP1-like

CARD_CASP1-like: cd08325 (4 - 84)

CASc

CASc: smart00115 (121 - 370)

  • 0
  • 100
  • 200
  • 300
  • 373 a.a.
蛋白主名 其他名称

caspase-4

caspase 11, apoptosis-related cysteine peptidase

caspase 11, apoptosis-related cysteine protease

caspase 4, apoptosis-related cysteine protease

caspase-11 short form splicing

protease ICH-3

Casp4 抗体

目录号 产品名 应用 反应物种
HY-P80588 Caspase 11 Antibody WB, IP Human, Mouse, Rat

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Casp4 NCBI NCBI:837