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  2. Apc - APC regulator of WNT signaling pathway Gene

Apc - APC regulator of WNT signaling pathway Gene

中文名称:WNT 信号通路的 APC 调节因子

种属: Rattus norvegicus

同用名: RATAPC

基因 ID: 24205 | 基因类型: protein coding

关于 Apc

Primary_assembly 18: 25,864,222-25,922,696 forward strand.mRatBN7.2:CM026991.1

This gene has 3 transcripts (splice variants), 169 orthologues, 1 paralogue and is associated with 90 phenotypes. Biased expression in Brain (RPKM 51.2), Lung (RPKM 138.6) and 9 other tissues.

功能概要

该基因编码的蛋白可启动微管结合活动。参与多个过程,包括细胞对神经生长因子刺激的反应;心肌细胞增殖的负调节;和调节谷氨酸代谢过程。位于多个细胞成分中,包括轴突生长锥;胞体纤维;和侧质膜。部分含蛋白质复合物。与神经元投射和突触共定位。用于研究贫血;结肠腺癌;结肠癌;和家族性腺瘤性息肉病。该基因的人类直系同源物与多种疾病有关,包括癌(多种);子宫内膜癌(多发性);家族性腺瘤性息肉病 1;遗传性硬纤维瘤病;和髓母细胞瘤。与人类 APC 同源(WNT 信号通路的 APC 调节剂)。 [由基因组资源联盟提供,2022 年 4 月]

Enables microtubule binding activity. Involved in several processes, including cellular response to nerve growth factor stimulus; negative regulation of cardiac muscle cell proliferation; and regulation of glutamate metabolic process. Located in several cellular components, including axonal growth cone; cell body fiber; and lateral plasma membrane. Part of protein-containing complex. Colocalizes with neuron projection and synapse. Used to study anemia; colon adenocarcinoma; colon cancer; and familial adenomatous polyposis. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); endometrial Cancer (multiple); familial adenomatous polyposis 1; hereditary desmoid disease; and medulloblastoma. Orthologous to human APC (APC regulator of Wnt signaling pathway). [provided by Alliance of Genome Resources, Apr 2022]

Apc 基因产物(1)

mRNA Protein Name
NM_012499.1 NP_036631.1 adenomatous polyposis coli protein
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables microtubule binding IDA
IDA: 通过直接分析推断
12610628 RGD
enables microtubule binding IMP
IMP: 通过突变表型推断
15670646 RGD
enables protein binding IPI
IPI: 通过物理相互作用推断
9786987 RGD
enables protein-containing complex binding IDA
IDA: 通过直接分析推断
19858196 RGD
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in cellular response to nerve growth factor stimulus IEP
IEP: 通过表达模式推断
22399805 RGD
involved in establishment or maintenance of cell polarity IDA
IDA: 通过直接分析推断
12610628 RGD
involved in negative regulation of cardiac muscle cell proliferation IMP
IMP: 通过突变表型推断
28948298 RGD
involved in neuron projection development IMP
IMP: 通过突变表型推断
16303851 RGD
involved in pancreas development IEP
IEP: 通过表达模式推断
16688812 RGD
involved in regulation of glutamate metabolic process IDA
IDA: 通过直接分析推断
19858196 RGD
involved in response to alcohol IEP
IEP: 通过表达模式推断
18945221 RGD
involved in response to xenobiotic stimulus IEP
IEP: 通过表达模式推断
11689703 RGD
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in axonal growth cone IDA
IDA: 通过直接分析推断
15670646 RGD
located in cell body fiber IDA
IDA: 通过直接分析推断
23001297 RGD
located in cell cortex IDA
IDA: 通过直接分析推断
18042042 RGD
located in dendrite IDA
IDA: 通过直接分析推断
15670646 RGD
located in growth cone IDA
IDA: 通过直接分析推断
16303851 RGD
located in lamellipodium IDA
IDA: 通过直接分析推断
15670646 RGD
located in lateral plasma membrane IDA
IDA: 通过直接分析推断
8638125 RGD
located in microtubule IDA
IDA: 通过直接分析推断
16767746 RGD
located in neuron projection terminus IDA
IDA: 通过直接分析推断
18042042 RGD
located in neuronal cell body IDA
IDA: 通过直接分析推断
8638125 RGD
located in nuclear membrane IDA
IDA: 通过直接分析推断
18042042 RGD
part of protein-containing complex IDA
IDA: 通过直接分析推断
19858196 RGD
located in synaptic vesicle membrane IDA
IDA: 通过直接分析推断
8638125 RGD
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Apc 蛋白结构

Suppressor_APC

Suppressor_APC: pfam11414 (134 - 214)

ARM

ARM: smart00185 (347 - 399)

APC_rep

APC_rep: pfam18797 (400 - 473)

ARM

ARM: sd00043 (497 - 533)

ARM

ARM: smart00185 (537 - 578)

ARM

ARM: sd00043 (541 - 578)

ARM

ARM: sd00043 (588 - 620)

ARM

ARM: sd00043 (628 - 669)

ARM

ARM: smart00185 (674 - 714)

ARM

ARM: sd00043 (678 - 712)

Arm

Arm: pfam00514 (716 - 756)

ARM

ARM: sd00043 (720 - 756)

Arm_APC_u3

Arm_APC_u3: pfam16629 (757 - 1044)

APC_u5

APC_u5: pfam16630 (1061 - 1160)

APC_r

APC_r: pfam05923 (1281 - 1298)

APC_u9

APC_u9: pfam16633 (1307 - 1392)

APC_r

APC_r: pfam05923 (1662 - 1685)

APC_u13

APC_u13: pfam16634 (1687 - 1739)

SAMP

SAMP: pfam05924 (1741 - 1762)

APC_u14

APC_u14: pfam16635 (1771 - 1864)

APC_u15

APC_u15: pfam16636 (1898 - 1972)

SAMP

SAMP: pfam05924 (2059 - 2078)

APC_basic

APC_basic: pfam05956 (2250 - 2595)

EB1_binding

EB1_binding: pfam05937 (2697 - 2869)

  • 0
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  • 2000
  • 2500
  • 2870 a.a.
蛋白主名 其他名称

adenomatous polyposis coli protein

APC, WNT signaling pathway regulator

WNT signaling pathway regulator

adenomatosis polyposis coli

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Apc NCBI NCBI:324
Macaca fascicularis Apc NCBI NCBI:102126553
Mus musculus Apc NCBI NCBI:11789
Susscrofa domestica Apc NCBI