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  2. HOXD8 - homeobox D8 Gene

HOXD8 - homeobox D8 Gene

中文名称:同源框 D8

种属: Homo sapiens

同用名: HOX4; HOX4E; HOX5.4

基因 ID: 3234 | 基因类型: protein coding

关于 HOXD8

Cytogenetic location: 2q31.1 Genomic coordinates (GRCh38): 2:176,129,705-176,132,695 (from NCBI)

This gene has 4 transcripts (splice variants), 119 orthologues and 42 paralogues. Biased expression in kidney (RPKM 23.0), ovary (RPKM 9.5) and 10 other tissues.

功能概要

该基因属于同源盒基因家族。同源框基因编码一个高度保守的转录因子家族,在所有多细胞生物的形态发生中起着重要作用。哺乳动物拥有 4 个相似的同源盒基因簇 HOXA、HOXB、HOXC 和 HOXD,分别位于不同的染色体上,由 9~11 个串联排列的基因组成。该基因是位于 2 号染色体簇中的几个同源框 HOXD 基因之一。删除整个 HOXD 基因簇或该簇 5' 端的缺失与严重的肢体和生殖器异常有关。除了在胚胎发生过程中产生影响外,这种特殊基因还可能在成人泌尿生殖道功能中发挥作用。交替剪接导致多个转录变体。[RefSeq 提供,2010 年 12 月]

This gene belongs to the homeobox family of genes. The homeobox genes encode a highly conserved family of transcription factors that play an important role in morphogenesis in all multicellular organisms. Mammals possess four similar homeobox gene clusters, HOXA, HOXB, HOXC and HOXD, located on different chromosomes, consisting of 9 to 11 genes arranged in tandem. This gene is one of several homeobox HOXD genes located in a cluster on chromosome 2. Deletions that remove the entire HOXD gene cluster or the 5' end of this cluster have been associated with severe limb and genital abnormalities. In addition to effects during embryogenesis, this particular gene may also play a role in adult urogenital tract function. Alternate splicing results in multiple transcript variants.[provided by RefSeq, Dec 2010]

HOXD8 基因产物(3)

mRNA Protein Name
NM_001199746.2 NP_001186675.1 homeobox protein Hox-D8 isoform 2
NM_001199747.2 NP_001186676.1 homeobox protein Hox-D8 isoform 3
NM_019558.4 NP_062458.1 homeobox protein Hox-D8 isoform 1
基因本体论
  • 分子功能
  • 生物过程
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
IDA: 通过直接分析推断
1756725 GOA
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
1756725 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
32296183 GOA
enables sequence-specific double-stranded DNA binding IDA
IDA: 通过直接分析推断
28473536 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
1756725 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

HOXD8 蛋白结构

Homeobox

Homeobox: Homeobox domain (198 - 254)

  • 0
  • 100
  • 200
  • 290 a.a.
蛋白主名 其他名称

homeobox protein Hox-D8

Hox-4.5

HOXD8 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra HOXD8 P13378 LDLRAP1 Homo sapiens Q5SW96
Validated Y2H
32296183
Intra HOXD8 P13378 BAIAP2 Homo sapiens Q9UQB8-6
Validated Y2H
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Synpolydactyly

Syndactyly Type 2

Syndactyly, Type 2

Spd

Clubfoot

Congenital Talipes Equinovarus

Congenital Clubfoot

Congenital Equinovarus

Equinovarus Deformity Of Foot

Club Foot

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus HOXD8 MGD MGI:96209
Felis catus HOXD8 VGNC VGNC:80232
Bos taurus HOXD8 VGNC VGNC:106772
Canis familiaris HOXD8 VGNC VGNC:41766
Macaca mulatta HOXD8 VGNC VGNC:99369
Rattus norvegicus HOXD8 RGD RGD:6489440