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  2. LAMB2 - laminin subunit beta 2 Gene

LAMB2 - laminin subunit beta 2 Gene

中文名称:层粘连蛋白亚基β2

种属: Homo sapiens

同用名: LAMS; NPHS5; PIERS

基因 ID: 3913 | 基因类型: protein coding

关于 LAMB2

Cytogenetic location: 3p21.31 Genomic coordinates (GRCh38): 3:49,121,114-49,133,050 (from NCBI)

This gene has 19 transcripts (splice variants), 198 orthologues, 27 paralogues and is associated with 6 phenotypes. Ubiquitous expression in heart (RPKM 75.8), placenta (RPKM 62.9) and 24 other tissues.

功能概要

层粘连蛋白是细胞外基质糖蛋白家族,是基底膜的主要非胶原成分。它们涉及多种生物过程,包括细胞粘附、分化、迁移、信号传导、神经突生长和转移。层粘连蛋白,由 3 条不相同的链组成:层粘连蛋白 alpha、beta 和 gamma (以前分别为 A、B1 和 B2) ,形成十字形结构,由 3 个短臂组成,每个短臂由不同的链组成,长臂由所有 3 条链。每条层粘连蛋白链都是由不同基因编码的多结构域蛋白质。已经描述了每条链的几种亚型。不同的 alpha、beta 和 gamma 链异构体结合产生不同的异源三聚体层粘连蛋白亚型,这些异构体按发现顺序用阿拉伯数字表示,即 alpha1beta1gamma1 异源三聚体是层粘连蛋白 1。不同链和三聚体分子的生物学功能在很大程度上是未知的, 但一些链已被证明在组织分布方面有所不同, 可能反映了体内的不同功能。该基因编码 β 链亚型层粘连蛋白,β 2。β 2 链包含层粘连蛋白 β 链典型的 7 个结构域,包括短 α 区域。然而,与 beta 1 链不同,beta 2 的组织分布更为有限。它富含神经肌肉接头、肾小球和血管平滑肌的肌肉基底膜。通过同源重组使 β 2 链基因失活的转基因小鼠表现出神经肌肉接头成熟缺陷和肾小球滤过障碍。已经报道了该基因 5' UTR 中涉及非共识 5' 剪接位点 (gc) 的可变剪接。有人提出,不改变蛋白质序列的第一个内含子的低效剪接导致转录本的未剪接形式比剪接形式的丰度更高。拼接转录本的全长性质尚不清楚。[RefSeq 提供,2011 年 8 月]

Laminins, a family of extracellular matrix glycoproteins, are the major noncollagenous constituent of basement membranes. They have been implicated in a wide variety of biological processes including cell adhesion, differentiation, migration, signaling, neurite outgrowth and metastasis. Laminins, composed of 3 non identical chains: laminin alpha, beta and gamma (formerly A, B1, and B2, respectively), form a cruciform structure consisting of 3 short arms, each formed by a different chain, and a long arm composed of all 3 chains. Each laminin chain is a multidomain protein encoded by a distinct gene. Several isoforms of each chain have been described. Different alpha, beta and gamma chain isomers combine to give rise to different heterotrimeric laminin isoforms which are designated by Arabic numerals in the order of their discovery, i.e. alpha1beta1gamma1 heterotrimer is laminin 1. The biological functions of the different chains and trimer molecules are largely unknown, but some of the chains have been shown to differ with respect to their tissue distribution, presumably reflecting diverse functions in vivo. This gene encodes the beta chain isoform laminin, beta 2. The beta 2 chain contains the 7 structural domains typical of beta chains of laminin, including the short alpha region. However, unlike beta 1 chain, beta 2 has a more restricted tissue distribution. It is enriched in the basement membrane of muscles at the neuromuscular junctions, kidney glomerulus and vascular smooth muscle. Transgenic mice in which the beta 2 chain gene was inactivated by homologous recombination, showed defects in the maturation of neuromuscular junctions and impairment of glomerular filtration. Alternative splicing involving a non consensus 5' splice site (gc) in the 5' UTR of this gene has been reported. It was suggested that inefficient splicing of this first intron, which does not change the protein sequence, results in a greater abundance of the unspliced form of the transcript than the spliced form. The full-length nature of the spliced transcript is not known. [provided by RefSeq, Aug 2011]

LAMB2 基因产物(1)

mRNA Protein Name
NM_002292.4 NP_002283.3 laminin subunit beta-2 precursor
基因本体论
  • 分子功能
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
32296183 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in basement membrane IDA
IDA: 通过直接分析推断
2099832 GOA
part of laminin-3 complex IPI
IPI: 通过物理相互作用推断
10964500 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

LAMB2 蛋白结构

Laminin_N

Laminin_N: Laminin N-terminal (Domain VI) (47 - 281)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (283 - 336)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (347 - 402)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (410 - 467)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (470 - 516)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (522 - 561)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (783 - 828)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (831 - 873)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (877 - 924)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (927 - 983)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (986 - 1035)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (1038 - 1092)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (1095 - 1136)

Laminin_EGF

Laminin_EGF: Laminin EGF domain (1143 - 1183)

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  • 1500
  • 1798 a.a.
蛋白主名 其他名称

laminin subunit beta-2

S-LAM beta

LAMB2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
LAMB2 P55268 TSR2 Homo sapiens Q969E8
Validated Y2H
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Pierson Syndrome

Microcoria-Congenital Nephrotic Syndrome

Microcoria-Congenital Nephrosis Syndrome

PIERS

Microcoria - Congenital Nephrosis

Microcoria - Congenital Nephrotic Syndrome

PIERSS

Nephrotic Syndrome, Type 5, With Or Without Ocular Abnormalities

NPHS5

Nephrotic Syndrome Type 5

Nephrotic Syndrome Type 5, With Or Without Ocular Abnormalities

Nephrotic Syndrome 5 With Or Without Ocular Abnormalities

Nephrotic Syndrome, Type 5, With/Without Ocular Abnormalities

Nephrotic Syndrome

Finnish Congenital Nephrotic Syndrome

Ns - [Nephrotic Syndrome]

Nephrosis Syndrome

Nephrosis Nos

Glomerular Lesion Nephrosis

Myasthenic Syndrome, Congenital, 5

Endplate Acetylcholinesterase Deficiency

Congenital Myasthenic Syndrome 5

CMS5

Ead

Engel Congenital Myasthenic Syndrome

Myasthenic Syndrome, Congenital, Engel Type

Cms Ic

Congenital Myasthenic Syndrome Type Ic

Congenital Myasthenic Syndrome Type Ic, Formerly

Cms1c, Formerly

Cms Ic, Formerly

Congenital Myasthenic Syndrome Engel Type

End Plate Acetylcholinesterase Deficiency

Synaptic Congenital Myasthenic Syndromes

Cms1c

Cmse

Congenital Myasthenic Syndrome Type 1c

End-Plate Acetylcholinesterase Deficiency

Myasthenic Syndrome, Congenital, Type 5

Diffuse Mesangial Sclerosis

Familial Mesangial Sclerosis

Mesangial Sclerosis, Diffuse

Dms

Diffuse Isolated Mesangial Sclerosis

Isolated Diffuse Mesangial Sclerosis

Nephrotic Syndrome, Early Onset With Diffuse Mesangial Sclerosis

Focal Segmental Glomerulosclerosis

Familial Idiopathic Steroid-Resistant Nephrotic Syndrome

Focal Glomerulosclerosis

Fsgs

Segmental Glomerulosclerosis

Glomerulosclerosis, Focal Segmental

Fgs

Focal Glomerular Sclerosis

Familial Idiopathic Nephrotic Syndrome

Focal Sclerosis With Hyalinosis

Glomerulosclerosis, Focal

Glomerulosclerosis Focal

Glomerulosclerosis, Segmental, Focal

Focal Segmental Glomerulosclerosis, Not Otherwise Specified

Focal Segmental Glomerulosclerosis 9

FSGS9

Glomerulosclerosis, Focal Segmental, 9

Glomerulosclerosis, Focal Segmental, Type 9

Focal Segmental Glomerulosclerosis 8

FSGS8

Glomerulosclerosis, Focal Segmental, 8

Glomerulosclerosis, Focal Segmental, Type 8

Focal Segmental Glomerulosclerosis 7

FSGS7

Glomerulosclerosis, Focal Segmental, 7

Glomerulosclerosis, Focal Segmental, Type 7

Walker-Warburg Syndrome

Hard Syndrome

Walker-Warburg Congenital Muscular Dystrophy

Cerebroocular Dysplasia-Muscular Dystrophy Syndrome

Cod-Md Syndrome

Chemke Syndrome

Hydrocephalus, Agyria And Retinal Dysplasia

Cerebroocular Dysgenesis

Cerebroocular Dysplasia Muscular Dystrophy Syndrome

Hard +/- E Syndrome

Pagon Syndrome

Warburg Syndrome

Hydrocephalus, Agyria, And Retinal Dysplasia

Mddga

Muscular Dystrophy-Dystroglycanopathy , Type A

Muscular Dystrophy-Dystroglycanopathy [With Brain And Eye Anomalies], Type A

Hydrocephalus-Agyria-Retinal Dysplasia Syndrome

Wws

Dystrophy, Muscular, Dystroglycanopathy, Type A

Focal Segmental Glomerulosclerosis 6

FSGS6

Glomerulosclerosis, Focal Segmental, 6

Glomerulosclerosis, Segmental, Focal, Type 6

Hypoparathyroidism, Sensorineural Deafness, And Renal Dysplasia Syndrome

Barakat Syndrome

Hypoparathyroidism, Sensorineural Deafness, And Renal Dysplasia

Hdr Syndrome

Nephrosis, Nerve Deafness, And Hypoparathyroidism

Hypoparathyroidism, Sensorineural Deafness, And Renal Disease

HDR

HDRS

Hypoparathyroidism-Sensorineural Deafness-Renal Disease Syndrome

Hypoparathyroidism-Sensorineural Hearing Loss-Renal Disease Syndrome

Nephrosis

Nephrotic Syndrome

Focal Segmental Glomerulosclerosis 5

FSGS5

Glomerulosclerosis, Focal Segmental, 5

Glomerulosclerosis, Segmental, Focal, Type 5

Focal Segmental Glomerulosclerosis 2

FSGS2

Glomerulosclerosis, Focal Segmental, 2

Glomerulosclerosis, Segmental, Focal, Type 2

Taylor'S Syndrome

Pelvic Congestion Syndrome

Congestion-Fibrosis Syndrome

Taylor Syndrome

Muscular Dystrophy

Muscular Dystrophies

Congenital Md

Congenital Muscular Dystrophy

Cmd

Mdc

Dystrophy, Muscular

Gower'S Muscular Dystrophy

Progressive Musclular Dystrophy

Pseudohypertrophic Atrophy

Pseudohypertrophic Muscle Paralysis

Pseudohypertrophic Muscular Atrophy

Pseudohypertrophic Muscular Dystrophy

Pseudohypertrophic Paralysis

Pseudomuscular Hypertrophy

Familial Nephrotic Syndrome

Congenital Nephrotic Syndrome

Nephrosis, Congenital

Finnish Congenital Nephrotic Syndrome

Congenital Myasthenic Syndrome

Congenital Myasthenia

Congenital Myasthenic Syndromes

Cms

Myasthenic Syndromes, Congenital

Myasthenic Syndromes Congenital

Myasthenic Syndrome, Congenital

Congenital Myasthenic Syndrome Ib

Congenital And Developmental Myasthenia

Developmental Myasthenia

Strabismus

Strabismus, Susceptibility To

Strabismus, Susceptibility To, 1

Strabismus 1

Alport Syndrome

Hereditary Nephritis

Alport Syndrome, X-Linked

Hemorrhagic Hereditary Nephritis

Congenital Hereditary Hematuria

Hemorrhagic Familial Nephritis

Familial Nephritis

Thin Basement Membrane Disease

Thin Basement Membrane Nephropathy

Hematuria-Nephropathy-Deafness Syndrome

Hematuric Hereditary Nephritis

Hereditary Familial Congenital Hemorrhagic Nephritis

Hereditary Hematuria Syndrome

Hereditary Interstitial Pyelonephritis

Alport Deafness-Nephropathy

Alport Hearing Loss-Nephropathy

Alports Syndrome

Nephritis, Hereditary

Hypotonia
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris LAMB2 VGNC VGNC:42568
Felis catus LAMB2 VGNC VGNC:68007
Mus musculus LAMB2 MGD MGI:99916
Macaca mulatta LAMB2 VGNC VGNC:74229
Rattus norvegicus LAMB2 RGD RGD:2988