1. Gene
  2. PTPRK - protein tyrosine phosphatase receptor type K Gene

PTPRK - protein tyrosine phosphatase receptor type K Gene

中文名称:K 型蛋白酪氨酸磷酸酶受体

种属: Homo sapiens

同用名: R-PTP-kappa

基因 ID: 5796 | 基因类型: protein coding

关于 PTPRK

Cytogenetic location: 6q22.33 Genomic coordinates (GRCh38): 6:127,968,785-128,520,599 (from NCBI)

This gene has 22 transcripts (splice variants), 1 gene allele, 209 orthologues, 35 paralogues and is associated with 90 phenotypes. Ubiquitous expression in gall bladder (RPKM 16.8), colon (RPKM 13.7) and 24 other tissues.

功能概要

该基因编码的蛋白质是蛋白酪氨酸磷酸酶 (PTP) 家族的成员。已知 PTP 是调节多种细胞过程的信号分子,包括细胞生长、分化、有丝分裂周期和致癌转化。该 PTP 具有细胞外区域、单个跨膜区域和两个串联催化结构域,因此代表受体型 PTP。细胞外区域包含安眠蛋白-A5 抗原-PTP mu (MAM) 结构域、Ig 样结构域和四个纤连蛋白 III 型样重复序列。该 PTP 显示可介导嗜同性细胞间相互作用,可能是通过与粘附连接处的 β- 和 γ- 连环蛋白相互作用。发现该基因的表达受到 TGF-β1 的刺激,这可能对抑制角质形成细胞增殖很重要。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is a member of the protein tyrosine Phosphatase (PTP) family. PTPs are known to be signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP possesses an extracellular region, a single transmembrane region, and two tandem catalytic domains, and thus represents a receptor-type PTP. The extracellular region contains a meprin-A5 antigen-PTP mu (MAM) domain, an Ig-like domain and four fibronectin type III-like repeats. This PTP was shown to mediate homophilic intercellular interaction, possibly through the interaction with beta- and gamma-catenin at adherens junctions. Expression of this gene was found to be stimulated by TGF-beta 1, which may be important for the inhibition of keratinocyte proliferation. [provided by RefSeq, Jul 2008]

PTPRK 基因产物(6)

mRNA Protein Name
NM_001135648.3 NP_001129120.1 receptor-type tyrosine-protein phosphatase kappa isoform a precursor
NM_001291981.2 NP_001278910.1 receptor-type tyrosine-protein phosphatase kappa isoform c precursor
NM_001291982.2 NP_001278911.1 receptor-type tyrosine-protein phosphatase kappa isoform d precursor
NM_001291983.2 NP_001278912.1 receptor-type tyrosine-protein phosphatase kappa isoform e
NM_001291984.2 NP_001278913.1 receptor-type tyrosine-protein phosphatase kappa isoform f precursor
NM_002844.4 NP_002835.2 receptor-type tyrosine-protein phosphatase kappa isoform b precursor
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables beta-catenin binding IPI
IPI: 通过物理相互作用推断
8663237 GOA
enables gamma-catenin binding IPI
IPI: 通过物理相互作用推断
8663237 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
15899872 GOA
enables protein kinase binding IPI
IPI: 通过物理相互作用推断
15899872 GOA
enables protein tyrosine phosphatase activity IDA
IDA: 通过直接分析推断
8663237 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in cell adhesion IMP
IMP: 通过突变表型推断
15899872 GOA
involved in cell migration IMP
IMP: 通过突变表型推断
15899872 GOA
involved in cellular response to UV IDA
IDA: 通过直接分析推断
16849327 GOA
involved in cellular response to reactive oxygen species IDA
IDA: 通过直接分析推断
16849327 GOA
involved in focal adhesion assembly IMP
IMP: 通过突变表型推断
15899872 GOA
involved in negative regulation of DNA-templated transcription IDA
IDA: 通过直接分析推断
18276111 GOA
involved in negative regulation of cell cycle IDA
IDA: 通过直接分析推断
15899872 GOA
involved in negative regulation of cell migration IDA
IDA: 通过直接分析推断
18276111 GOA
involved in negative regulation of cell population proliferation IDA
IDA: 通过直接分析推断
15899872 GOA
involved in negative regulation of keratinocyte proliferation IDA
IDA: 通过直接分析推断
16263724 GOA
involved in protein dephosphorylation IDA
IDA: 通过直接分析推断
16263724 GOA
involved in protein localization to cell surface IDA
IDA: 通过直接分析推断
18276111 GOA
involved in signal transduction IDA
IDA: 通过直接分析推断
16849327 GOA
involved in transforming growth factor beta receptor signaling pathway IDA
IDA: 通过直接分析推断
15899872 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cell surface IDA
IDA: 通过直接分析推断
18276111 GOA
located in cell-cell junction IDA
IDA: 通过直接分析推断
8663237 GOA
located in leading edge membrane IDA
IDA: 通过直接分析推断
15899872 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

PTPRK 蛋白结构

MAM

MAM: MAM domain, meprin/A5/mu (36 - 193)

Ig_2

Ig_2: Immunoglobulin domain (201 - 288)

fn3

fn3: Fibronectin type III domain (296 - 370)

fn3

fn3: Fibronectin type III domain (504 - 582)

Y_phosphatase

Y_phosphatase: Protein-tyrosine phosphatase (910 - 1140)

Y_phosphatase

Y_phosphatase: Protein-tyrosine phosphatase (1200 - 1434)

  • 0
  • 300
  • 600
  • 900
  • 1200
  • 1439 a.a.
蛋白主名 其他名称

receptor-type tyrosine-protein phosphatase kappa

dJ480J14.2.1 (protein tyrosine phosphatase, receptor type, K (R-PTP-KAPPA, protein tyrosine phosphatase kappa , protein tyrosine phosphatase kappa

PTPRK 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
PTPRK Q15262 LOX Homo sapiens P28300
Anti Tag CoIP
21690299
种属内
PTPRK Q15262 LOX Homo sapiens P28300
Anti Bait CoIP
21690299
种属内
PTPRK Q15262 INSR Homo sapiens P06213
Anti Tag CoIP
33961781
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Extragonadal Germ Cell Cancer

Extragonadal Germ Cell Tumor

Extragonadal Germ Cell Malignant Tumor

Neoplasm Of Extragonadal Germ Cell

Tumor Of Extragonadal Germ Cell

Eye Lymphoma

Malignant Lymphoma Of Eye

Lymphoma Of Eye

Central Nervous System Hematologic Cancer

Cns Hematopoietic Tumor

Hematopoietic Neoplasm Of Central Nervous System

Central Nervous System Hematopoietic Neoplasm

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus PTPRK VGNC VGNC:33552
Mus musculus PTPRK MGD MGI:103310
Canis familiaris PTPRK VGNC VGNC:45191
Felis catus PTPRK VGNC VGNC:69176
Macaca mulatta PTPRK VGNC VGNC:83453
Rattus norvegicus PTPRK RGD RGD:619706
Others PTPRK NCBI