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  2. SNX27 - sorting nexin 27 Gene

SNX27 - sorting nexin 27 Gene

中文名称:排序 nexin 27

种属: Homo sapiens

同用名: MRT1; MY014

基因 ID: 81609 | 基因类型: protein coding

关于 SNX27

Cytogenetic location: 1q21.3 Genomic coordinates (GRCh38): 1:151,612,050-151,699,080 (from NCBI)

This gene has 18 transcripts (splice variants), 271 orthologues and 2 paralogues. Ubiquitous expression in brain (RPKM 9.5), kidney (RPKM 6.7) and 25 other tissues.

功能概要

该基因编码分选连接蛋白家族的成员,这是一组不同的细胞质和膜相关蛋白,参与质膜受体的内吞作用和通过这些隔室的蛋白质运输。该蛋白家族的所有成员都包含一个磷酸肌醇结合域 (PX 域) 。小鼠中一种高度相似的蛋白质负责将血清素 5-羟色胺 4 受体的同种型特异性募集到早期核内体中,这表明人类蛋白质具有类似的作用。[RefSeq 提供,2008 年 7 月]

This gene encodes a member of the sorting nexin family, a diverse group of cytoplasmic and membrane-associated proteins involved in endocytosis of plasma membrane receptors and protein trafficking through these compartments. All members of this protein family contain a phosphoinositide binding domain (PX domain). A highly similar protein in mouse is responsible for the specific recruitment of an isoform of serotonin 5-hydroxytryptamine 4 receptor into early endosomes, suggesting the analogous role for the human protein. [provided by RefSeq, Jul 2008]

SNX27 基因产物(2)

mRNA Protein Name
NM_001330723.2 NP_001317652.1 sorting nexin-27 isoform 1
NM_030918.6 NP_112180.4 sorting nexin-27 isoform 2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables phosphatidylinositol-3-phosphate binding IDA
IDA: 通过直接分析推断
21300787 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
19555689 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in endocytic recycling IMP
IMP: 通过突变表型推断
20733053 GOA
involved in endosomal transport IMP
IMP: 通过突变表型推断
21300787 GOA
acts upstream of or within endosome to lysosome transport IMP
IMP: 通过突变表型推断
22411990 GOA
involved in intracellular protein transport IMP
IMP: 通过突变表型推断
20733053 GOA
involved in regulation of synapse maturation IDA
IDA: 通过直接分析推断
33330482 GOA
involved in regulation of synapse maturation IMP
IMP: 通过突变表型推断
33330482 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of WASH complex IDA
IDA: 通过直接分析推断
21602791 GOA
located in early endosome IDA
IDA: 通过直接分析推断
20733053 GOA
is active in glutamatergic synapse IDA
IDA: 通过直接分析推断
33330482 GOA
is active in glutamatergic synapse IMP
IMP: 通过突变表型推断
33330482 GOA
located in immunological synapse IDA
IDA: 通过直接分析推断
17644068 GOA
part of retromer complex IDA
IDA: 通过直接分析推断
23563491 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SNX27 蛋白结构

PDZ

PDZ: PDZ domain (Also known as DHR or GLGF) (45 - 132)

PX

PX: PX domain (168 - 264)

RA

RA: Ras association (RalGDS/AF-6) domain (276 - 359)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 541 a.a.
蛋白主名 其他名称

sorting nexin-27

methamphetamine-responsive transcript 1

SNX27 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SNX27 Q96L92 ACE2 Homo sapiens Q9BYF1
Pull Down
34835087
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Dravet Syndrome

Severe Myoclonic Epilepsy Of Infancy

Severe Myoclonic Epilepsy In Infancy

Smei

Epileptic Encephalopathy, Early Infantile, 6

DRVT

Developmental And Epileptic Encephalopathy 6a

Dee6a

Eiee6

Developmental And Epileptic Encephalopathy, 6

Dee6

Developmental And Epileptic Encephalopathy 6

Early Infantile Epileptic Encephalopathy 6

Myoclonic Epilepsy, Severe, Of Infancy

Sme

Severe Myoclonus Epilepsy Of Infancy

Borderline Smei

Smeb

Smeb-M

Smeb-O

Smeb-Sw

Smei-Borderland

Smei-Borderland More Than One Feature

Smei-Borderland-Myoclonic Seizures

Smei-Borderland-Spike Wave

Intractable Childhood Epilepsy With Generalized Tonic-Clonic Seizures

ICEGTC

Infantile Severe Myoclonic Epilepsy

Epilepsy, Intractable Childhood, With Generalized Tonic-Clonic Seizures

Down Syndrome

Trisomy 21

Complete Trisomy 21 Syndrome

Down'S Syndrome

Trisomy 21 Syndrome

Down'S Syndrome - Trisomy 21

Downs Syndrome

G Trisomy

47,Xx,+21

47,Xy,+21

Trisomy G

Down Syndrome, Susceptibility To

Chromosome 21 Trisomy

Trisomy 21 Nos

Abnormal Autosomes 21

Menkes Disease

Copper Transport Disease

Menkes Syndrome

MNK

Kinky Hair Disease

Steely Hair Disease

Menkes Kinky-Hair Syndrome

Mk

Steely Hair Syndrome

Menkea Syndrome

Md

Menkes Kinky Hair Syndrome

Hypocupremia, Congenital

Kinky Hair Syndrome

X-Linked Copper Deficiency

Menkes Kinky Hair Disease

Chromosomal Duplication Syndrome
Parkinson Disease, Late-Onset

Parkinson Disease

Parkinson'S Disease

PD

PARK

Parkinson Disease, Susceptibility To

Late Onset Parkinson'S Disease

Late Onset Parkinson Disease

Paralysis Agitans

Primary Parkinsonism

Idiopathic Parkinson Disease

Parkinson'S

Parkinson Disease, Late-Onset, Susceptibility To

Parkinson Disease, Age Of Onset, Modifier

Lewy Body Parkinson Disease

Idiopathic Parkinson'S Disease

Pd - [Parkinson Disease]

Parkinson Disease Nos

Parkinson, Nos

Primary Parkinson Disease

Hereditary Spastic Paraplegia

Familial Spastic Paraplegia

Hereditary Spastic Paraparesis

Strumpell-Lorrain Disease

Familial Spastic Paraparesis

Hsp

Spg

Strümpell-Lorrain Disease

Spastic Paraplegia, Hereditary

French Settlement Disease

Strumpell-Lorrain Syndrome

Fsp

Spastic Paraplegia, Familial

Spastic Paraplegia Hereditary

Spastic Paraplegia 3, Autosomal Dominant

Spastic Paraparesis

Hereditary Spastic Paralysis

Familial Spastic Paralysis

Hereditary Spastic Ataxia

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus SNX27 VGNC VGNC:35105
Felis catus SNX27 VGNC VGNC:107624
Rattus norvegicus SNX27 RGD RGD:628705
Macaca mulatta SNX27 VGNC VGNC:77742
Mus musculus SNX27 MGD MGI:1923992
Canis familiaris SNX27 VGNC VGNC:46634