1. Gene
  2. RFXANK - regulatory factor X associated ankyrin containing protein Gene

RFXANK - regulatory factor X associated ankyrin containing protein Gene

中文名称:含调节因子 X 相关锚蛋白

种属: Homo sapiens

同用名: BLS; RFX-B; ANKRA1; F14150_1

基因 ID: 8625 | 基因类型: protein coding

关于 RFXANK

Cytogenetic location: 19p13.11 Genomic coordinates (GRCh38): 19:19,192,258-19,201,866 (from NCBI)

This gene has 15 transcripts (splice variants), 188 orthologues, 3 paralogues and is associated with 2 phenotypes. Ubiquitous expression in thyroid (RPKM 13.0), bone marrow (RPKM 11.7) and 25 other tissues.

功能概要

主要组织相容性 (MHC) II 类分子是跨膜蛋白,在免疫系统的发育和控制中起着核心作用。该基因编码的蛋白质与调节因子 X 相关蛋白和调节因子 5 一起形成一个复合物,该复合物与某些 MHC II 类基因启动子的 X 盒基序结合并激活它们的转录。一旦与启动子结合,该复合物就会与非 DNA 结合因子 MHC II 类反式激活因子结合,后者控制细胞类型特异性和 MHC II 类基因表达的诱导性。这种蛋白质包含参与蛋白质-蛋白质相互作用的锚蛋白重复序列。该基因的突变与 II 型裸淋巴细胞综合征、B 型互补组有关。已针对该基因描述了编码不同亚型的多个可变剪接转录物变体。[RefSeq 提供,2013 年 7 月]

Major histocompatibility (MHC) class II molecules are transmembrane proteins that have a central role in development and control of the immune system. The protein encoded by this gene, along with regulatory factor X-associated protein and regulatory factor-5, forms a complex that binds to the X box motif of certain MHC class II gene promoters and activates their transcription. Once bound to the promoter, this complex associates with the non-DNA-binding factor MHC class II transactivator, which controls the cell type specificity and inducibility of MHC class II gene expression. This protein contains ankyrin repeats involved in protein-protein interactions. Mutations in this gene have been linked to bare lymphocyte syndrome type II, complementation group B. Multiple alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Jul 2013]

RFXANK 基因产物(10)

mRNA Protein Name
NM_001278727.2 NP_001265656.1 DNA-binding protein RFXANK isoform c
NM_001278728.2 NP_001265657.1 DNA-binding protein RFXANK isoform b
NM_001370233.1 NP_001357162.1 DNA-binding protein RFXANK isoform a
NM_001370234.1 NP_001357163.1 DNA-binding protein RFXANK isoform c
NM_001370235.1 NP_001357164.1 DNA-binding protein RFXANK isoform d
NM_001370236.1 NP_001357165.1 DNA-binding protein RFXANK isoform d
NM_001370237.1 NP_001357166.1 DNA-binding protein RFXANK isoform e
NM_001370238.1 NP_001357167.1 DNA-binding protein RFXANK isoform f
NM_003721.4 NP_003712.1 DNA-binding protein RFXANK isoform a
NM_134440.3 NP_604389.1 DNA-binding protein RFXANK isoform b
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
contributes to DNA-binding transcription activator activity, RNA polymerase II-specific IDA
IDA: 通过直接分析推断
9806546 GOA
contributes to RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
IDA: 通过直接分析推断
9806546 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
10938133 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in positive regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
9806546 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of RNA polymerase II transcription regulator complex IPI
IPI: 通过物理相互作用推断
9806546 GOA
located in nucleus IDA
IDA: 通过直接分析推断
10938133 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

RFXANK 蛋白结构

Ank_2

Ank_2: Ankyrin repeats (3 copies) (91 - 152)

Ank_2

Ank_2: Ankyrin repeats (3 copies) (161 - 239)

  • 0
  • 100
  • 200
  • 260 a.a.
蛋白主名 其他名称

DNA-binding protein RFXANK

RFX-Bdelta4

RFXANK 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra RFXANK O14593 RFX7 Homo sapiens Q2KHR2
X-Ray Diffraction
31864703
Intra RFXANK O14593 RFX7 Homo sapiens Q2KHR2
Anti Tag CoIP
33961781
Intra RFXANK O14593 RFX7 Homo sapiens Q2KHR2
Anti Tag CoIP
25752541
Intra RFXANK O14593 RFXAP Homo sapiens O00287
Anti Tag CoIP
33961781
Intra RFXANK O14593 RFXAP Homo sapiens O00287
Pull Down
10938133
Intra RFXANK O14593 RFXAP Homo sapiens O00287
Anti Tag CoIP
25752541
Intra RFXANK O14593 RFX5 Homo sapiens P48382
Anti Tag CoIP
33961781
Intra RFXANK O14593 RFX5 Homo sapiens P48382
Anti Tag CoIP
25752541
Intra RFXANK O14593 RFX5 Homo sapiens P48382
Pull Down
10938133
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Bare Lymphocyte Syndrome, Type Ii

Mhc Class Ii Deficiency

Bare Lymphocyte Syndrome

Major Histocompatibility Complex Class Ii Deficiency

Bare Lymphocyte Syndrome 2

Bare Lymphocyte Syndrome Type 2

Severe Combined Immunodeficiency, Hla Class Ii-Negative

Bare Lymphocyte Syndrome, Type Ii, Complementation Group C

Bare Lymphocyte Syndrome, Type Ii, Complementation Group D

Bare Lymphocyte Syndrome Type Ii

Scid, Hla Class Ii-Negative

Bare Lymphocyte Syndrome, Type Ii, Complementation Group A

Bare Lymphocyte Syndrome, Type Ii, Complementation Group B

Scid Due To Absent Class Ii Hla Antigens

Hla Class 1 Deficiency

Scid, Hla Class 2-Negative

Bls Type Ii

Bare Lymphocyte Syndrome Type 2, Complementation Group A

Bare Lymphocyte Syndrome Type 2, Complementation Group E

Severe Combined Immunodeficiency

Bls, Type Ii

Bls

Bare Lymphocyte Syndrome, Type Ii, Complementation Group E

Blsii

Bls Type 1

Bls 2

Scid Due To Absence Of Class Ii Hla Antigens

Severe Combined Immunodeficiency Due To Absent Class Ii Human Leukocyte Antigens

Immunodeficiency By Defective Expression Of Mhc Class Ii

BLS2

Bare Lymphocyte Syndrome Type Ii Complementation Group A

Bare Lymphocyte Syndrome Type Ii Complementation Group B

Bare Lymphocyte Syndrome Type Ii Complementation Group C

Bare Lymphocyte Syndrome Type Ii Complementation Group D

Bare Lymphocyte Syndrome Type Ii Complementation Group E

Bls Ii

Hereditary Mhc Class Ii Deficiency

Hla Class Ii Deficient Combined Immunodeficiency

Mhc-Ii Deficiency

Scid Hla Class Ii-Negative

Severe Combined Immunodeficiency Hla Class Ii-Negative

Bl-2

Immunodeficiency By Defective Expression Of Hla Class 2

Hla Class 2-Negative Severe Combined Immunodeficiency

Combined Immunodeficiency

Combined T Cell And B Cell Immunodeficiency

Congenital Combined Immunodeficiency

Syndrome With Combined Immunodeficiency

Combined T And B Cell Immunodeficiency

Combined Immunity Deficiency

Combined Immunodeficiency Syndrome

Combined T-Cell And B-Cell Immunodeficiency

Lymphopenic Agammaglobulinaemia

Severe Combined Immunodeficiency

Scid

Severe Combined Immunodeficiency Disease

Combined T And B Cell Inborn Immunodeficiency

Immunodeficiency, Severe Combined

Scid - [Severe Combined Immunodeficiencies]

Bare Lymphocyte Syndrome, Type I

Hla Class I Deficiency

Mhc Class I Deficiency

Bls, Type I

Bare Lymphocyte Syndrome Type I

Bare Lymphocyte Syndrome, Type I, Due To Tap2 Deficiency

Blsi

Mhc Class 1 Deficiency

Major Histocompatibility Complex Class 1 Deficiency

Bare Lymphocyte Syndrome 1

BLS1

Bls I

Bls Type I

Bl-1

Bare Lymphocyte Syndrome Type 1

Immunodeficiency By Defective Expression Of Hla - [Human Leukocyte Antigen] Class 1

Scid - [Severe Combined Immunodeficiency] Due To Absent Class 2 Hla Antigens

Bls - [Bare Lymphocyte Syndrome] Nos

Retinitis Pigmentosa 48

RP48

Retinitis Pigmentosa, Type 48

Immune Deficiency Disease

Immunodeficiency

Primary Immunodeficiency

Primary Immunodeficiency Disease

Immunologic Deficiency Syndromes

Hypoimmunity

Immune Deficiency Disorder

Immunodeficiency Syndrome

Immune Disorder

Primary Immune Deficiency Disorder

Immune System Diseases

Human Immunodeficiency Virus Infection

Hiv - [Human Immunodeficiency Virus Infection]

Hiv Positive Nos

Hiv Disease

Acquired Immune Deficiency Syndrome-Related Complex

Aids-Like Syndrome

Aids-Related Complex Nos

Arc - [Aids-Related Complex]

Immunodeficiency Due To Human Immunodeficiency Virus Infection

Unspecified Human Immunodeficiency Virus Disease

Hiv Disease Nos

Human Immunodeficiency Virus Positive Nos

Hiv Nos

Deficiency Of Complement Initial Pathway

Deficiency Of Complement Terminal Pathway

Cfdd - [Complement Factor D Deficiency]

Immunodeficiency With Nk-Cell - [Natural-Killer Cell] Deficiency

Nonfamilial Hypogammaglobulinaemia

Common Variable Immune Deficiency

Nonfamilial Agammaglobulinaemia

Common Variable Agammaglobulinaemia

Agammaglobulinaemia Nos

Agammaglobulinaemia Antibody Deficiency Syndrome

Hypogammaglobulinaemia Antibody Deficiency Syndrome

Acquired Agammaglobulinaemia Nos

Hypogammaglobulinaemia Nos

Hyper Igm

Immunodeficiency 13

Idiopathic Cd4 Lymphopenia

IMD13

Icl

Immunodeficiency, Type 13

Omenn Syndrome

Histiocytic Medullary Reticulosis

Severe Combined Immunodeficiency With Hypereosinophilia

Combined Immunodeficiency With Hypereosinophilia

Reticuloendotheliosis, Familial, With Eosinophilia

Reticuloendotheliosis Familial With Eosinophilia

Familial Reticuloendotheliosis

Omenn'S Syndrome

OS

Malignant Histiocytosis

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus RFXANK VGNC VGNC:33900
Rattus norvegicus RFXANK RGD RGD:1311390
Macaca mulatta RFXANK VGNC VGNC:76910
Mus musculus RFXANK MGD MGI:1333865
Canis familiaris RFXANK VGNC VGNC:45511
Felis catus RFXANK VGNC VGNC:69308