1. Gene
  2. SNX4 - sorting nexin 4 Gene

SNX4 - sorting nexin 4 Gene

中文名称:排序 nexin 4

种属: Homo sapiens

同用名: ATG24B

基因 ID: 8723 | 基因类型: protein coding

关于 SNX4

Cytogenetic location: 3q21.2 Genomic coordinates (GRCh38): 3:125,446,650-125,520,202 (from NCBI)

This gene has 5 transcripts (splice variants), 204 orthologues and 15 paralogues. Ubiquitous expression in thyroid (RPKM 29.2), kidney (RPKM 26.4) and 25 other tissues.

功能概要

该基因编码分选连接蛋白家族的一个成员。该家族的成员包含一个 phox (PX) 结构域,它是一个磷酸肌醇结合结构域,并参与细胞内运输。这种蛋白质与瘦素受体的长亚型以及细胞培养物中血小板衍生生长因子、胰岛素和表皮生长因子的受体酪氨酸激酶相关,但其功能未知。这种蛋白质可能与家族成员形成寡聚复合物。已发现该基因的两种转录变体,一种是蛋白质编码,另一种是非蛋白质编码。[RefSeq 提供,2012 年 11 月]

This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein associated with the long isoform of the Leptin receptor and with Receptor Tyrosine Kinases for platelet-derived growth factor, Insulin, and epidermal growth factor in cell cultures, but its function is unknown. This protein may form oligomeric complexes with family members. Two transcript variants, one protein coding and the Other non-protein coding, have been found for this gene. [provided by RefSeq, Nov 2012]

SNX4 基因产物(1)

mRNA Protein Name
NM_003794.4 NP_003785.1 sorting nexin-4
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables epidermal growth factor receptor binding IDA
IDA: 通过直接分析推断
9819414 GOA
enables insulin receptor binding IDA
IDA: 通过直接分析推断
9819414 GOA
enables leptin receptor binding IDA
IDA: 通过直接分析推断
9819414 GOA
enables phosphatidylinositol binding IMP
IMP: 通过突变表型推断
17994011 GOA
enables phosphatidylinositol-3-phosphate binding IMP
IMP: 通过突变表型推断
33468622 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
9819414 GOA
enables transferrin receptor binding IDA
IDA: 通过直接分析推断
9819414 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in endocytic recycling IMP
IMP: 通过突变表型推断
17994011 GOA
involved in positive regulation of autophagosome assembly IMP
IMP: 通过突变表型推断
32513819 GOA
involved in positive regulation of histamine secretion by mast cell IMP
IMP: 通过突变表型推断
18253931 GOA
involved in protein transport IMP
IMP: 通过突变表型推断
17994011 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of SNARE complex IDA
IDA: 通过直接分析推断
18253931 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
11279102 GOA
part of cytoplasmic dynein complex IDA
IDA: 通过直接分析推断
17994011 GOA
is active in early endosome IDA
IDA: 通过直接分析推断
32513819 GOA
is active in early endosome membrane IDA
IDA: 通过直接分析推断
33468622 GOA
located in early endosome membrane IDA
IDA: 通过直接分析推断
17994011 GOA
located in membrane IDA
IDA: 通过直接分析推断
9819414 GOA
located in plasma membrane IDA
IDA: 通过直接分析推断
18253931 GOA
part of protein-containing complex IDA
IDA: 通过直接分析推断
9819414 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SNX4 蛋白结构

PX

PX: PX domain (59 - 183)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 450 a.a.
蛋白主名 其他名称

sorting nexin-4

SNX4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SNX4 O95219 MAGEA6 Homo sapiens P43360
Validated Y2H
25416956
种属内
SNX4 O95219 MAGEA6 Homo sapiens P43360
Y2H Array
25416956
种属内
SNX4 O95219 SNX7 Homo sapiens Q9UNH6-3
Validated Y2H
32296183
种属内
SNX4 O95219 SNX7 Homo sapiens Q9UNH6-3
Y2H Array
32296183
种属内
SNX4 O95219 SNX7 Homo sapiens Q9UNH6-3
Y2H Prey Pooling
32296183
种属内
SNX4 O95219 DGAT2L6 Homo sapiens Q6ZPD8
Validated Y2H
32296183
种属内
SNX4 O95219 DGAT2L6 Homo sapiens Q6ZPD8
Y2H Array
32296183
种属内
SNX4 O95219 DGAT2L6 Homo sapiens Q6ZPD8
Y2H Prey Pooling
32296183
种属内
SNX4 O95219 SH3GLB1 Homo sapiens Q9Y371
Validated Y2H
32296183
种属内
SNX4 O95219 BIN1 Homo sapiens O00499
Y2H
12668730
种属内
SNX4 O95219 BIN1 Homo sapiens O00499
Anti Bait CoIP
12668730
种属内
SNX4 O95219 SNX7 Homo sapiens Q9UNH6
Anti Tag CoIP
35271311
种属内
SNX4 O95219 SNX30 Homo sapiens Q5VWJ9
Pull Down
23085988
种属内
SNX4 O95219 SNX30 Homo sapiens Q5VWJ9
Anti Tag CoIP
35271311
种属内
SNX4 O95219 SNX30 Homo sapiens Q5VWJ9
Anti Tag CoIP
28514442
种属内
SNX4 O95219 SNX30 Homo sapiens Q5VWJ9
Anti Tag CoIP
33961781
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Bos taurus SNX4 VGNC VGNC:35111
Mus musculus SNX4 MGD MGI:1916400
Rattus norvegicus SNX4 RGD RGD:1309763
Macaca mulatta SNX4 VGNC VGNC:77684
Canis familiaris SNX4 VGNC VGNC:46641
Felis catus SNX4 VGNC VGNC:65557