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  2. CDYL - chromodomain Y like Gene

CDYL - chromodomain Y like Gene

中文名称:染色体 Y 样

种属: Homo sapiens

同用名: CDYL1

基因 ID: 9425 | 基因类型: protein coding

关于 CDYL

Cytogenetic location: 6p25.1 Genomic coordinates (GRCh38): 6:4,706,138-4,955,544 (from NCBI)

This gene has 9 transcripts (splice variants), 215 orthologues and 13 paralogues. Ubiquitous expression in placenta (RPKM 8.5), endometrium (RPKM 8.1) and 25 other tissues.

功能概要

染色体 Y 是灵长类动物特异性 Y 染色体基因家族,仅在睾丸中表达并与不育有关。虽然 Y 连锁基因是睾丸特异性的,但这种常染色体基因普遍表达。 Y 连锁基因是通过对该基因的 mRNA 进行逆转录转座,然后扩增逆转录基因而产生的。由该基因超家族编码的蛋白质具有一个染色质结构域,一个与染色质结合和基因抑制有关的基序,以及一个被认为与组蛋白乙酰化有关的催化结构域。多种蛋白质由该基因的转录变体编码。[RefSeq 提供,2008 年 7 月]

Chromodomain Y is a primate-specific Y-chromosomal gene family expressed exclusively in the testis and implicated in infertility. Although the Y-linked genes are testis-specific, this autosomal gene is ubiquitously expressed. The Y-linked genes arose by retrotransposition of an mRNA from this gene, followed by amplification of the retroposed gene. Proteins encoded by this gene superfamily possess a chromodomain, a motif implicated in chromatin binding and gene suppression, and a catalytic domain believed to be involved in histone acetylation. Multiple proteins are encoded by transcript variants of this gene. [provided by RefSeq, Jul 2008]

CDYL 基因产物(6)

mRNA Protein Name
NM_001143970.2 NP_001137442.1 chromodomain Y-like protein isoform d
NM_001143971.2 NP_001137443.1 chromodomain Y-like protein isoform d
NM_001368125.1 NP_001355054.1 chromodomain Y-like protein isoform e
NM_001368126.1 NP_001355055.1 chromodomain Y-like protein isoform f
NM_001368127.1 NP_001355056.1 chromodomain Y-like protein isoform g
NM_004824.4 NP_004815.3 chromodomain Y-like protein isoform a
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables crotonyl-CoA hydratase activity IDA
IDA: 通过直接分析推断
28803779 GOA
enables identical protein binding IPI
IPI: 通过物理相互作用推断
32296183 GOA
NOT enables methylated histone binding IDA
IDA: 通过直接分析推断
18450745 GOA
enables methylated histone binding IDA
IDA: 通过直接分析推断
22009739 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
16415788 GOA
enables protein-macromolecule adaptor activity IPI
IPI: 通过物理相互作用推断
19061646 GOA
enables transcription corepressor activity IMP
IMP: 通过突变表型推断
19061646 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in negative regulation of peptidyl-lysine crotonylation IDA
IDA: 通过直接分析推断
28803779 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in nucleus IDA
IDA: 通过直接分析推断
18450745 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

CDYL 蛋白结构

Chromo

Chromo: Chromo (CHRromatin Organisation MOdifier) domain (62 - 112)

ECH_1

ECH_1: Enoyl-CoA hydratase/isomerase (348 - 591)

  • 0
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  • 500
  • 598 a.a.
蛋白主名 其他名称

chromodomain Y-like protein

CDY-like, autosomal

CDYL 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
CDYL Q9Y232 FXR1 Homo sapiens P51114 21653829
种属内
CDYL Q9Y232 FXR1 Homo sapiens P51114 21653829
种属内
CDYL Q9Y232 H3C1 Homo sapiens P68431 16415788
种属内
CDYL Q9Y232 H3C1 Homo sapiens P68431 16415788
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Chromosome 6pter-P24 Deletion Syndrome

6p Subtelomeric Deletion Syndrome

6p25 Microdeletion Syndrome

Distal Monosomy 6p

Distal Deletion 6p

Monosomy 6p25

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus CDYL RGD RGD:1549745
Felis catus CDYL VGNC VGNC:102399
Macaca mulatta CDYL VGNC VGNC:70998
Mus musculus CDYL MGD MGI:1339956
Bos taurus CDYL VGNC VGNC:55900
Canis familiaris CDYL VGNC VGNC:59137