1. Gene
  2. SART3 - spliceosome associated factor 3, U4/U6 recycling protein Gene

SART3 - spliceosome associated factor 3, U4/U6 recycling protein Gene

中文名称:剪接体相关因子 3,U4/U6 回收蛋白

种属: Homo sapiens

同用名: P100; p110; DSAP1; TIP110; p110(nrb); RP11-13G14

基因 ID: 9733 | 基因类型: protein coding

关于 SART3

Cytogenetic location: 12q23.3 Genomic coordinates (GRCh38): 12:108,522,214-108,561,173 (from NCBI)

This gene has 17 transcripts (splice variants) and 210 orthologues. Ubiquitous expression in testis (RPKM 12.7), lymph node (RPKM 12.3) and 25 other tissues.

功能概要

该基因编码的蛋白质是一种 RNA 结合核蛋白,是一种肿瘤排斥抗原。该抗原具有能够在癌症患者中诱导 HLA-A24 限制性和肿瘤特异性细胞毒性 T 淋巴细胞的肿瘤表位,可用于特异性免疫治疗。该基因产物被发现是 HIV-1 基因表达和病毒复制的重要细胞因子。它还在剪接体循环的回收阶段与 U6 和 U4/U6 snRNP 短暂结合。这种编码的蛋白质被认为参与了 mRNA 剪接的调节。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is an RNA-binding nuclear protein that is a tumor-rejection antigen. This antigen possesses tumor epitopes capable of inducing HLA-A24-restricted and tumor-specific cytotoxic T lymphocytes in Cancer patients and may be useful for specific immunotherapy. This gene product is found to be an important cellular factor for HIV-1 gene expression and viral replication. It also associates transiently with U6 and U4/U6 snRNPs during the recycling phase of the spliceosome cycle. This encoded protein is thought to be involved in the regulation of mRNA splicing. [provided by RefSeq, Jul 2008]

SART3 基因产物(2)

mRNA Protein Name
NM_001410983.1 NP_001397912.1 squamous cell carcinoma antigen recognized by T-cells 3 isoform 2
NM_014706.4 NP_055521.1 squamous cell carcinoma antigen recognized by T-cells 3 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
NOT enables U4 snRNA binding IDA
IDA: 通过直接分析推断
15314151 GOA
enables U4 snRNA binding IDA
IDA: 通过直接分析推断
12032085 GOA
NOT enables U6 snRNA binding IDA
IDA: 通过直接分析推断
15314151 GOA
enables U6 snRNA binding IDA
IDA: 通过直接分析推断
12032085 GOA
enables U6atac snRNA binding IDA
IDA: 通过直接分析推断
14749385 GOA
enables histone binding IDA
IDA: 通过直接分析推断
24526689 GOA
enables protein binding IDA
IDA: 通过直接分析推断
32839293 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
11477570 GOA
enables ubiquitin-specific protease binding IPI
IPI: 通过物理相互作用推断
20595234 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in mRNA splicing, via spliceosome IDA
IDA: 通过直接分析推断
15314151 GOA
involved in nucleosome assembly IDA
IDA: 通过直接分析推断
24526689 GOA
acts upstream of or within regulation of gene expression IDA
IDA: 通过直接分析推断
21447833 GOA
NOT involved in spliceosomal snRNP assembly IDA
IDA: 通过直接分析推断
15314151 GOA
involved in spliceosomal snRNP assembly IDA
IDA: 通过直接分析推断
14749385 GOA
involved in spliceosomal tri-snRNP complex assembly IDA
IDA: 通过直接分析推断
12032085 GOA
involved in transcription elongation-coupled chromatin remodeling IDA
IDA: 通过直接分析推断
24526689 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in Cajal body IDA
IDA: 通过直接分析推断
12578909 GOA
part of U4/U6 snRNP IDA
IDA: 通过直接分析推断
12032085 GOA
NOT part of U4/U6 x U5 tri-snRNP complex IDA
IDA: 通过直接分析推断
12032085 GOA
NOT part of U4atac/U6atac snRNP IDA
IDA: 通过直接分析推断
14749385 GOA
part of U6atac snRNP IDA
IDA: 通过直接分析推断
14749385 GOA
located in nucleoplasm IDA
IDA: 通过直接分析推断
12578909 GOA
is active in nucleus IDA
IDA: 通过直接分析推断
32839293 GOA
located in nucleus IDA
IDA: 通过直接分析推断
24526689 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SART3 蛋白结构

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (706 - 774)

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (803 - 871)

Lsm_interact

Lsm_interact: Lsm interaction motif (942 - 962)

  • 0
  • 200
  • 400
  • 600
  • 800
  • 963 a.a.
蛋白主名 其他名称

squamous cell carcinoma antigen recognized by T-cells 3

HIV-1 Tat-interacting protein of 110kDa

SART3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SART3 Q15020 RNPS1 Homo sapiens Q15287 11477570
种属内
SART3 Q15020 RNPS1 Homo sapiens Q15287
Y2H
11477570
种属内
SART3 Q15020 RNPS1 Homo sapiens Q15287 11477570
种属内
SART3 Q15020 RNPS1 Homo sapiens Q15287 11477570
种属内
SART3 Q15020 ZNF620 Homo sapiens Q6ZNG0 32296183
种属内
SART3 Q15020 ZNF620 Homo sapiens Q6ZNG0 32296183
种属内
SART3 Q15020 ZNF620 Homo sapiens Q6ZNG0 32296183
种属内
SART3 Q15020 ZNF71 Homo sapiens Q9NQZ8 32296183
种属内
SART3 Q15020 ZNF71 Homo sapiens Q9NQZ8 32296183
种属内
SART3 Q15020 ZNF71 Homo sapiens Q9NQZ8 32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Porokeratosis

Disseminated Superficial Actinic Porokeratosis

Dsap

Porokeratosis Of Mibelli

Porokeratosis, Disseminated Superficial Actinic

Porokeratosis, Disseminated Superficial Actinic, 1

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta SART3 VGNC VGNC:77029
Canis familiaris SART3 VGNC VGNC:57174
Rattus norvegicus SART3 RGD RGD:1311646
Mus musculus SART3 MGD MGI:1858230
Bos taurus SART3 VGNC VGNC:57216
Felis catus SART3 VGNC VGNC:64877