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  2. PDCD6IP - programmed cell death 6 interacting protein Gene

PDCD6IP - programmed cell death 6 interacting protein Gene

中文名称:程序性细胞死亡 6 相互作用蛋白

种属: Homo sapiens

同用名: AIP1; ALIX; HP95; DRIP4; MCPH29

基因 ID: 10015 | 基因类型: protein coding

关于 PDCD6IP

Cytogenetic location: 3p22.3 Genomic coordinates (GRCh38): 3:33,798,630-33,869,703 (from NCBI)

This gene has 18 transcripts (splice variants) and 45 orthologues. Ubiquitous expression in colon (RPKM 28.2), esophagus (RPKM 23.0) and 25 other tissues.

功能概要

该基因编码一种蛋白质,该蛋白质在胞质分裂脱落阶段、腔内内体囊泡形成和包膜病毒出芽中的 ESCRT 通路中发挥作用。使用小鼠细胞的研究表明,这种蛋白质的过度表达可以阻止细胞凋亡。此外,该基因的产物以钙依赖性方式与细胞凋亡所需的蛋白质 PDCD6 基因的产物结合。该基因产物还与 endophilins 结合,后者是在内吞过程中调节膜形状的蛋白质。该基因产物和内皮素的过表达导致细胞质空泡化,这可能是防止细胞死亡的部分原因。已经为该基因发现了几种编码不同亚型的可变剪接转录物变体。已在 15 号染色体上鉴定出相关的假基因。[RefSeq 提供,2012 年 1 月]

This gene encodes a protein that functions within the ESCRT pathway in the abscission stage of cytokinesis, in intralumenal endosomal vesicle formation, and in enveloped virus budding. Studies using mouse cells have shown that overexpression of this protein can block Apoptosis. In addition, the product of this gene binds to the product of the PDCD6 gene, a protein required for Apoptosis, in a calcium-dependent manner. This gene product also binds to endophilins, proteins that regulate membrane shape during endocytosis. Overexpression of this gene product and endophilins results in cytoplasmic vacuolization, which may be partly responsible for the protection against cell death. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. Related pseudogenes have been identified on chromosome 15. [provided by RefSeq, Jan 2012]

PDCD6IP 基因产物(3)

mRNA Protein Name
NM_001162429.3 NP_001155901.1 programmed cell death 6-interacting protein isoform 2
NM_001256192.2 NP_001243121.1 programmed cell death 6-interacting protein isoform 3
NM_013374.6 NP_037506.2 programmed cell death 6-interacting protein isoform 1

PDCD6IP 蛋白结构

BRO1

BRO1: BRO1-like domain (4 - 382)

ALIX_LYPXL_bnd

ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV (409 - 702)

  • 0
  • 200
  • 400
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  • 800
  • 868 a.a.
蛋白主名 其他名称

programmed cell death 6-interacting protein

ALG-2 interacting protein 1

PDCD6IP 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra PDCD6IP Q8WUM4 CHMP4C Homo sapiens Q96CF2
SPR
18511562
Intra PDCD6IP Q8WUM4 CHMP4C Homo sapiens Q96CF2
X-Ray Diffraction
18511562
Intra PDCD6IP Q8WUM4 CD2AP Homo sapiens Q9Y5K6
Anti Tag CoIP
17853893
Intra PDCD6IP Q8WUM4 HCK Homo sapiens P08631
ITC
20670214
Intra PDCD6IP Q8WUM4 HCK Homo sapiens P08631
Y2H
22641034
Intra PDCD6IP Q8WUM4 HCK Homo sapiens P08631
NMR
22641034
Intra PDCD6IP Q8WUM4 PDCD6 Homo sapiens O75340
Pull Down
18940611
Intra PDCD6IP Q8WUM4 PDCD6 Homo sapiens O75340
Anti Tag CoIP
18256029
Intra PDCD6IP Q8WUM4 PDCD6 Homo sapiens O75340
Pull Down
18256029
Cross PDCD6IP Q8WUM4 Hoxa1 Mus musculus P09022
Pull Down
23088713
Intra PDCD6IP Q8WUM4 FYN Homo sapiens P06241
Y2H
22641034
Cross PDCD6IP Q8WUM4 nef Human immunodeficiency virus Q90VU7
BiFC
25118280
Cross PDCD6IP Q8WUM4 nef Human immunodeficiency virus Q90VU7
Pull Down
25118280
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
Y2H Array
25416956
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
IF
17853893
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
Y2H
17853893
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
Y2H Prey Pooling
25416956
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
Anti Tag CoIP
35271311
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
Y2H Array
31515488
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
Pull Down
18940611
Intra PDCD6IP Q8WUM4 CEP55 Homo sapiens Q53EZ4
Validated Y2H
25416956
Intra PDCD6IP Q8WUM4 CHMP4A Homo sapiens Q9BY43
SPR
18511562
Intra PDCD6IP Q8WUM4 CHMP4A Homo sapiens Q9BY43
X-Ray Diffraction
18511562
Intra PDCD6IP Q8WUM4 CHMP4B Homo sapiens Q9H444
SPR
18511562
Intra PDCD6IP Q8WUM4 CHMP4B Homo sapiens Q9H444
X-Ray Diffraction
18511562
Intra PDCD6IP Q8WUM4 CHMP4B Homo sapiens Q9H444
Anti Tag CoIP
21889351
Cross PDCD6IP Q8WUM4 Chmp4b Mus musculus Q9D8B3
Anti Bait CoIP
25686249
Cross PDCD6IP Q8WUM4 gag Human immunodeficiency virus P03347
SPR
17350572
Cross PDCD6IP Q8WUM4 gag Equine infectious anemia virus P69730
SPR
17350572
Cross PDCD6IP Q8WUM4 gag Human immunodeficiency virus O91079
FPS
37219487
Cross PDCD6IP Q8WUM4 gag Human immunodeficiency virus O91079
FPS
37100772
Cross PDCD6IP Q8WUM4 P29991-PRO_0000308465 Dengue virus type 2 P29991-PRO_0000308465
Y2H
21911577
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Microcephaly 29, Primary, Autosomal Recessive

MCPH29

Microcephaly

Microencephaly

Microcephalus

Microcephalic

Nanocephaly

Congenital Microcephaly

Brain Hypoplasia

Brain Nondevelopment

Cephalic Hypoplasia

Undeveloped Cerebrum

Undeveloped Brain

Micrencephalon

Micrencephaly

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus PDCD6IP MGD MGI:1333753
Felis catus PDCD6IP VGNC VGNC:68746
Macaca mulatta PDCD6IP VGNC VGNC:75795
Rattus norvegicus PDCD6IP RGD RGD:68357
Bos taurus PDCD6IP VGNC VGNC:32664
Canis familiaris PDCD6IP VGNC VGNC:44341
Others PDCD6IP NCBI