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  2. Dnmt1 - DNA methyltransferase (cytosine-5) 1 Gene

Dnmt1 - DNA methyltransferase (cytosine-5) 1 Gene

中文名称:DNA 甲基转移酶 (cytosine-5) 1

种属: Mus musculus

同用名: Dnmt; MCMT; Met1; Cxxc9; MTase; Met-1; Dnmt1o; m.MmuI; MommeD2

基因 ID: 13433 | 基因类型: protein coding

关于 Dnmt1

Chromosome 9: 20,818,505-20,871,184 reverse strand.GRCm39:CM001002.3

This gene has 7 transcripts (splice variants), 215 orthologues, 1 paralogue and is associated with 21 phenotypes. Ubiquitous expression in CNS E11.5 (RPKM 37.3), thymus adult (RPKM 36.6) and 27 other tissues.

功能概要

该基因编码的甲基转移酶优先甲基化半甲基化 DNA 中 CpG 残基的胞嘧啶,从而在 DNA 复制过程中产生完全甲基化的 CpG 碱基对。这种酶在多种细胞过程中发挥作用,包括细胞周期调节、DNA 修复和端粒维持。编码的蛋白质由一个具有核定位序列和复制叉靶向结构域的 N 末端结构域、一个 DNA 结合 CXXC 结构域、两个溴代相邻同源结构域和一个 C 末端催化结构域组成。该基因的小鼠胚胎干细胞突变体是可行的,但当引入种系时,会导致隐性致死表型,突变体胚胎显示发育迟缓和发育缺陷。可变剪接导致多个转录本变体。 [RefSeq 提供,2015 年 9 月]

This gene encodes a methyltransferase that preferentially methylates cytosines of CpG residues in hemimethylated DNA to generate fully methylated CpG base pairs during DNA replication. This Enzyme plays roles in diverse cellular processes including cell cycle regulation, DNA repair, and telomere maintenance. The encoded protein is composed of an N-terminal domain with a nuclear localization sequence and replication fork-targeting domain, a DNA-binding CXXC domain, two bromo-adjacent homology domains, and a C-terminal catalytic domain. Mouse embryonic stem cells mutant for this gene are viable, but when introduced into the germ line, cause a recessive lethal phenotype with mutant embryos displaying stunted growth and developmental defects. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2015]

Dnmt1 基因产物(6)

mRNA Protein Name
NM_001199431.2 NP_001186360.2 DNA (cytosine-5)-methyltransferase 1 isoform 1
NM_001199432.2 NP_001186361.1 DNA (cytosine-5)-methyltransferase 1 isoform 3
NM_001314011.2 NP_001300940.1 DNA (cytosine-5)-methyltransferase 1 isoform 5
NM_001199433.2 NP_001186362.1 DNA (cytosine-5)-methyltransferase 1 isoform 4
NM_001404685.2 NP_001391614.2 DNA (cytosine-5)-methyltransferase 1 isoform 6
NM_010066.5 NP_034196.5 DNA (cytosine-5)-methyltransferase 1 isoform 2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA (cytosine-5-)-methyltransferase activity IDA
IDA: 通过直接分析推断
11399088 MGI
enables DNA binding IDA
IDA: 通过直接分析推断
11399088 MGI
enables DNA-methyltransferase activity IMP
IMP: 通过突变表型推断
1606615 MGI
enables RNA binding IDA
IDA: 通过直接分析推断
20573698 MGI
enables chromatin binding IDA
IDA: 通过直接分析推断
24105743 MGI
enables lncRNA binding IDA
IDA: 通过直接分析推断
25686699 MGI
enables methyl-CpG binding IDA
IDA: 通过直接分析推断
20573698 MGI
enables methyltransferase activity IDA
IDA: 通过直接分析推断
10615135 MGI
enables protein binding IPI
IPI: 通过物理相互作用推断
10615135 MGI
enables zinc ion binding IDA
IDA: 通过直接分析推断
11399088 MGI
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in DNA methylation-dependent heterochromatin formation IDA
IDA: 通过直接分析推断
10615135 MGI
acts upstream of DNA-templated transcription IMP
IMP: 通过突变表型推断
17245608 MGI
acts upstream of or within cellular response to amino acid stimulus IDA
IDA: 通过直接分析推断
20548288 MGI
acts upstream of or within cellular response to bisphenol A IDA
IDA: 通过直接分析推断
21980460 MGI
acts upstream of or within chromosomal DNA methylation maintenance following DNA replication IDA
IDA: 通过直接分析推断
11399088 MGI
acts upstream of or within chromosomal DNA methylation maintenance following DNA replication IGI
IGI: 通过遗传相互作用推断
27841881 MGI
acts upstream of or within chromosomal DNA methylation maintenance following DNA replication IMP
IMP: 通过突变表型推断
16887828 MGI
acts upstream of or within epigenetic programming of gene expression IGI
IGI: 通过遗传相互作用推断
27841881 MGI
acts upstream of or within epigenetic programming of gene expression IMP
IMP: 通过突变表型推断
1606615 MGI
acts upstream of or within positive effect epigenetic programming of gene expression IMP
IMP: 通过突变表型推断
29117290 MGI
acts upstream of or within negative regulation of DNA-templated transcription IMP
IMP: 通过突变表型推断
17245608 MGI
acts upstream of or within negative regulation of gene expression IMP
IMP: 通过突变表型推断
29117290 MGI
involved in negative regulation of gene expression via chromosomal CpG island methylation IMP
IMP: 通过突变表型推断
17576694 MGI
acts upstream of or within negative regulation of transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
10888872 MGI
acts upstream of or within negative regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
16887828 MGI
acts upstream of or within regulation of cell population proliferation IGI
IGI: 通过遗传相互作用推断
10919675 MGI
acts upstream of or within regulation of gene expression IMP
IMP: 通过突变表型推断
16491076 MGI
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in female germ cell nucleus IDA
IDA: 通过直接分析推断
15063176 MGI
located in germ cell nucleus IDA
IDA: 通过直接分析推断
15063176 MGI
located in heterochromatin IDA
IDA: 通过直接分析推断
14519686 MGI
located in nucleus IDA
IDA: 通过直接分析推断
11942627 MGI
located in pericentric heterochromatin IDA
IDA: 通过直接分析推断
17576694 MGI
located in replication fork IDA
IDA: 通过直接分析推断
10888872 MGI
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

Dnmt1 蛋白结构

DMAP_binding

DMAP_binding: pfam06464 (15 - 105)

PRK12678

PRK12678: cl36163 (116 - 294)

DNMT1-RFD

DNMT1-RFD: pfam12047 (404 - 539)

zf-CXXC

zf-CXXC: pfam02008 (647 - 693)

BAH_Dnmt1_I

BAH_Dnmt1_I: cd04760 (757 - 880)

BAH_Dnmt1_II

BAH_Dnmt1_II: cd04711 (968 - 1103)

Dcm

Dcm: COG0270 (1140 - 1593)

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  • 1620 a.a.
蛋白主名 其他名称

DNA (cytosine-5)-methyltransferase 1

DNA MTase MmuI

DNA methyltransferase MmuI

直系同源

种属 基因名 来源 基因 ID
Homo sapiens Dnmt1 NCBI NCBI:1786