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  2. DDX1 - DEAD-box helicase 1 Gene

DDX1 - DEAD-box helicase 1 Gene

中文名称:死盒解旋酶 1

种属: Homo sapiens

同用名: DBP-RB; UKVH5d

基因 ID: 1653 | 基因类型: protein coding

关于 DDX1

Cytogenetic location: 2p24.3 Genomic coordinates (GRCh38): 2:15,591,868-15,631,101 (from NCBI)

This gene has 24 transcripts (splice variants), 198 orthologues and 38 paralogues. Ubiquitous expression in thyroid (RPKM 36.4), brain (RPKM 36.1) and 25 other tissues.

功能概要

以保守基序 Asp-Glu-Ala-Asp (DEAD) 为特征的 DEAD 盒蛋白是推定的 RNA 解旋酶。它们涉及许多涉及 RNA 二级结构改变的细胞过程,例如翻译起始、核和线粒体剪接以及核糖体和剪接体组装。根据它们的分布模式,该家族的一些成员被认为参与了胚胎发生、精子发生以及细胞生长和分裂。该基因编码一种 DEAD 盒蛋白,该蛋白充当 ATP 依赖性 RNA 解旋酶,已被发现可促进冠状病毒复制。[RefSeq 提供,2021 年 8 月]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein that acts as an ATP-dependent RNA helicase that has been found to promote coronaviruses replication. [provided by RefSeq, Aug 2021]

DDX1 基因产物(1)

mRNA Protein Name
NM_004939.3 NP_004930.1 ATP-dependent RNA helicase DDX1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA/RNA helicase activity IDA
IDA: 通过直接分析推断
18710941 GOA
enables RNA helicase activity IDA
IDA: 通过直接分析推断
12183465 GOA
enables chromatin binding IDA
IDA: 通过直接分析推断
19058135 GOA
enables nuclease activity IDA
IDA: 通过直接分析推断
18710941 GOA
enables poly(A) binding IDA
IDA: 通过直接分析推断
12183465 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
11598190 GOA
enables transcription coregulator activity IDA
IDA: 通过直接分析推断
19058135 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in DNA duplex unwinding IDA
IDA: 通过直接分析推断
18710941 GOA
involved in double-strand break repair IDA
IDA: 通过直接分析推断
18710941 GOA
involved in nucleic acid metabolic process IDA
IDA: 通过直接分析推断
18710941 GOA
involved in protein localization to cytoplasmic stress granule IMP
IMP: 通过突变表型推断
24965446 GOA
involved in tRNA splicing, via endonucleolytic cleavage and ligation IMP
IMP: 通过突变表型推断
24870230 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cleavage body IDA
IDA: 通过直接分析推断
11598190 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
24608264 GOA
located in cytoplasmic stress granule IDA
IDA: 通过直接分析推断
18335541 GOA
located in nucleus IDA
IDA: 通过直接分析推断
19058135 GOA
part of ribonucleoprotein complex IDA
IDA: 通过直接分析推断
18809582 GOA
part of tRNA-splicing ligase complex IDA
IDA: 通过直接分析推断
21311021 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

DDX1 蛋白结构

DEAD

DEAD: DEAD/DEAH box helicase (26 - 418)

SPRY

SPRY: SPRY domain (130 - 245)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (538 - 609)

  • 0
  • 200
  • 400
  • 600
  • 740 a.a.
蛋白主名 其他名称

ATP-dependent RNA helicase DDX1

DEAD (Asp-Glu-Ala-Asp) box helicase 1

DDX1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
DDX1 Q92499 RTRAF Homo sapiens Q9Y224
Anti Tag CoIP
33961781
种属内
DDX1 Q92499 RTRAF Homo sapiens Q9Y224
GMS
24608264
种属内
DDX1 Q92499 FAM98A Homo sapiens Q8NCA5
Anti Tag CoIP
33961781
种属内
DDX1 Q92499 FAM98A Homo sapiens Q8NCA5
Anti Tag CoIP
28040436
种属间
DDX1 Q92499 N SARS-CoV-2 P0DTC9
Confocal
35107372
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Retinoblastoma

RB

Trilateral Retinoblastoma

RB1

Retinoblastoma, Trilateral

Neuroblastoma Of Retina

Rb - Retinoblastoma

Eye Cancer, Retinoblastoma

Retinal Cancer

Retinal Tumor

Glioma, Retinal

Non-Hereditary Retinoblastoma

Childhood Cancer Retinoblastoma

Malignant Neoplasm Of Retina

Retinal Neoplasms

Bronchitis

Chronic Bronchitis

Acute Bronchitis

Bronchitis, Chronic

Acute Bronchitis And Bronchiolitis

Chest Cold

Chest Infection

Ci - Chest Infection

Recurrent Wheezy Bronchitis

Bronchitis Chronic

Lower Respiratory Tract Infection

Acute Lower Respiratory Tract Infection

Chronic Bronchitis Nos

Senile Bronchitis

Bronchitis Nos In Those Under L5 Years Of Age

Bronchitis Nos

Small Cell Carcinoma

Small Cell Carcinoma, Intermediate Cell

Intermediate Cell Small Cell Carcinoma

Small Cell Carcinoma - Intermediate Cell

Small Cell Carcinoma Of Lung

Carcinoma, Small Cell

Venezuelan Equine Encephalitis

Venezuelan Equine Fever

Venezuelan Equine Encephalomyelitis

Encephalitis Venezuelan Equine

Encephalomyelitis, Venezuelan Equine

Venezuelan Encephalitis

Disorder Due To Venezuelan Equine Encephalitis Virus

Venezuelan Equine Encephalitis Virus Infection

Venezuelan Equine Encephalomyelitis Virus Disease

Encephalitis

Mumps Encephalitis

Mumps Meningoencephalitis

Herpes Simplex Neuroinvasion

Herpetic Encephalitis

Herpetic Encephalopathy

Herpes Simplex Encephalitis, Myelitis Or Encephalomyelitis

Encephalitis Due To Herpesviridae

Encephalitis Due To Herpesvirus

Herpes Encephalitis

Herpesviral Encephalitis

Herpes Simplex Encephalitis

Hsv - [Herpes Simplex Virus] Encephalitis

Herpes Virus Encephalitis

Simian B Disease

Simian B Disorder

Encephalitis Nec

Idiopathic Encephalitis

Heavy Chain Disease

Hcd

Neuroblastoma

Nb

Neuroblastoma, Susceptibility To

Neuroblastomas

Central Neuroblastoma

Lacrimal Duct Obstruction

Blocked Lacrimal Canaliculus

Obstruction Of Lacrimal Canaliculus

Obstruction Of Lacrimal Ducts

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus DDX1 RGD RGD:619903
Macaca mulatta DDX1 VGNC VGNC:71759
Mus musculus DDX1 MGD MGI:2144727
Canis familiaris DDX1 VGNC VGNC:39844
Bos taurus DDX1 VGNC VGNC:27955
Felis catus DDX1 VGNC VGNC:61396
Others DDX1 NCBI