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  2. DHX30 - DExH-box helicase 30 Gene

DHX30 - DExH-box helicase 30 Gene

中文名称:DExH-box 解旋酶 30

种属: Homo sapiens

同用名: DDX30; RETCOR; NEDMIAL

基因 ID: 22907 | 基因类型: protein coding

关于 DHX30

Cytogenetic location: 3p21.31 Genomic coordinates (GRCh38): 3:47,803,138-47,850,193 (from NCBI)

This gene has 15 transcripts (splice variants), 190 orthologues, 18 paralogues and is associated with 2 phenotypes. Broad expression in testis (RPKM 30.7), brain (RPKM 11.0) and 25 other tissues.

功能概要

以保守基序 Asp-Glu-Ala-Asp (DEAD) 为特征的 DEAD 盒蛋白是推定的 RNA 解旋酶。它们涉及许多涉及 RNA 二级结构改变的细胞过程,例如翻译起始、核和线粒体剪接以及核糖体和剪接体组装。根据它们的分布模式,该 DEAD 盒蛋白家族的一些成员被认为参与了胚胎发生、精子发生以及细胞生长和分裂。由该基因编码的家族成员是一种与线粒体 DNA 结合的线粒体类核蛋白。它还被确定为在视网膜发育中起作用的转录抑制复合物的组分,需要它来优化锌指抗病毒蛋白的功能。已发现该基因的可变剪接转录物变体。[RefSeq 提供,2013 年 2 月]

DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. The family member encoded by this gene is a mitochondrial nucleoid protein that associates with mitochondrial DNA. It has also been identified as a component of a transcriptional repressor complex that functions in retinal development, and it is required to optimize the function of the zinc-finger Antiviral protein. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Feb 2013]

DHX30 基因产物(3)

mRNA Protein Name
NM_001330990.2 NP_001317919.1 ATP-dependent RNA helicase DHX30 isoform 4
NM_014966.4 NP_055781.2 ATP-dependent RNA helicase DHX30 isoform 2
NM_138615.3 NP_619520.1 ATP-dependent RNA helicase DHX30 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA binding IDA
IDA: 通过直接分析推断
29100085 GOA
enables RNA helicase activity IDA
IDA: 通过直接分析推断
29100085 GOA
enables chromatin binding IDA
IDA: 通过直接分析推断
18063578 GOA
enables double-stranded RNA binding IDA
IDA: 通过直接分析推断
21266579 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
17932509 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in mitochondrial large ribosomal subunit assembly IMP
IMP: 通过突变表型推断
25683715 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
29100085 GOA
located in mitochondrial nucleoid IDA
IDA: 通过直接分析推断
18063578 GOA
located in mitochondrion IDA
IDA: 通过直接分析推断
29100085 GOA
located in ribonucleoprotein granule IDA
IDA: 通过直接分析推断
25683715 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

DHX30 蛋白结构

DEAD

DEAD: DEAD/DEAH box helicase (445 - 594)

Helicase_C

Helicase_C: Helicase conserved C-terminal domain (697 - 786)

HA2

HA2: Helicase associated domain (HA2) (851 - 939)

OB_NTP_bind

OB_NTP_bind: Oligonucleotide/oligosaccharide-binding (OB)-fold (1007 - 1102)

  • 0
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  • 1000
  • 1194 a.a.
蛋白主名 其他名称

ATP-dependent RNA helicase DHX30

DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 30

DHX30 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra DHX30 Q7L2E3 CFTR Homo sapiens P13569
Ub Reconstruction
35156780
Intra DHX30 Q7L2E3 H1-5 Homo sapiens P16401
Crosslink
30021884
Intra DHX30 Q7L2E3 OAS3 Homo sapiens Q9Y6K5
Anti Tag CoIP
21903422
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Neurodevelopmental Disorder With Severe Motor Impairment And Absent Language

NEDMIAL

Oculomotor Apraxia
Strabismus

Strabismus, Susceptibility To

Strabismus, Susceptibility To, 1

Strabismus 1

Microcephaly

Microencephaly

Microcephalus

Microcephalic

Nanocephaly

Congenital Microcephaly

Brain Hypoplasia

Brain Nondevelopment

Cephalic Hypoplasia

Undeveloped Cerebrum

Undeveloped Brain

Micrencephalon

Micrencephaly

Peroxisome Biogenesis Disorder 2a

PBD2A

Peroxisome Biogenesis Disorder Complementation Group 2

PBD-CG2

Cg1

Pbd-Cge

Peroxisome Biogenesis Disorder Complementation Group E

Peroxisome Biogenesis Disorder, Type 2a

Autism

Autistic Disorder

Autism Susceptibility 1

Childhood Autism

Autistic Disorder Of Childhood Onset

Infantile Autism

Kanner'S Syndrome

Autistic

Congenital Contractures Of The Limbs And Face, Hypotonia, And Developmental Delay

CLIFAHDD

Congenital Limbs-Face Contractures-Hypotonia-Developmental Delay Syndrome

Clifahdd Syndrome

Doid:0081048

Contractures, Limbs And Face, Congenital, Hypotonia, And Developmental Delay

Syndromic X-Linked Intellectual Disability Turner Type

Mental Retardation, X-Linked Syndromic, Turner Type

Intellectual Disability, X-Linked Syndromic, Turner Type

Brooks-Wisniewski-Brown Syndrome

Mental Retardation And Macrocephaly Syndrome

Mrxst

X-Linked Intellectual Disability, Brooks Type

Mental Retardation, X-Linked, Syndromic, Turner Type

Hyperinsulinemic Hypoglycemia, Familial, 4

Hyperinsulinism Due To Glutamodehydrogenase Deficiency

HHF4

Familial Hyperinsulinemic Hypoglycemia 4

Hyperinsulinemic Hypoglycemia Due To Short Chain 3-Hydroxylacyl-Coa Dehydrogenase Deficiency

Hyperinsulinism Due To Schad Deficiency

Hyperinsulinism Due To Short Chain 3-Hydroxylacyl-Coa Dehydrogenase Deficiency

Congenital Hyperinsulinism

Schad Deficiency

Persistent Hyperinsulinemic Hypoglycemia Of Infancy

Phhi

3-Hydroxyacyl-Coa Dehydrogenase Deficiency

Brugada Syndrome 5

BRGDA5

Cardiac Conduction Defect, Nonspecific

Brugada Syndrome, Type 5

Coffin-Siris Syndrome 1

Coffin-Siris Syndrome

Fifth Digit Syndrome

Css

CSS1

Mrd12

Mental Retardation, Autosomal Dominant 12

Hhid

Dwarfism-Onychodysplasia

Hypertrichosis, Hyperkeratosis, Mental Retardation, And Distinctive Facial Features

Autosomal Dominant Mental Retardation 12

Short Stature-Onychodysplasia.

Intellectual Disability With Absent Fifth Fingernail And Terminal Phalanx

Mental Retardation With Hypoplastic Fifth Fingernails And Toenails

Short Stature-Onychodysplasia

Coffin-Siris Syndrome, Type 1

Mental Retardation, Autosomal Dominant, Type 12

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus DHX30 VGNC VGNC:28051
Macaca mulatta DHX30 VGNC VGNC:71632
Felis catus DHX30 VGNC VGNC:61477
Rattus norvegicus DHX30 RGD RGD:1308888
Mus musculus DHX30 MGD MGI:1920081
Canis familiaris DHX30 VGNC VGNC:39942