1. Gene
  2. MKRN1 - makorin ring finger protein 1 Gene

MKRN1 - makorin ring finger protein 1 Gene

中文名称:makorin 无名指蛋白 1

种属: Homo sapiens

同用名: RNF61

基因 ID: 23608 | 基因类型: protein coding

关于 MKRN1

Cytogenetic location: 7q34 Genomic coordinates (GRCh38): 7:140,453,033-140,479,569 (from NCBI)

This gene has 16 transcripts (splice variants), 129 orthologues and 2 paralogues. Ubiquitous expression in bone marrow (RPKM 50.0), testis (RPKM 49.4) and 25 other tissues.

功能概要

该基因编码的蛋白质属于一类新型锌指蛋白。编码的蛋白质作为转录共调节因子和 E3 泛素连接酶发挥作用,促进靶蛋白的泛素化和蛋白酶体降解。该基因编码的蛋白质被认为可以调节 RNA 聚合酶 II 催化的转录。这种蛋白质的 E3 泛素连接酶活性的底物包括西尼罗河病毒的衣壳蛋白和端粒酶核糖核蛋白的催化亚基。该蛋白通过调节细胞周期调节因子 p21 和肿瘤抑制蛋白 p53 来控制细胞周期停滞和细胞凋亡。该基因的假基因存在于 1、3、9、12 和 20 号染色体以及 X 染色体上。可变剪接导致编码不同异构体的多个转录变体。[RefSeq 提供,2014 年 4 月]

This gene encodes a protein that belongs to a novel class of zinc finger proteins. The encoded protein functions as a transcriptional co-regulator, and as an E3 ubiquitin Ligase that promotes the ubiquitination and proteasomal degradation of target proteins. The protein encoded by this gene is thought to regulate RNA polymerase II-catalyzed transcription. Substrates for this protein's E3 ubiquitin Ligase activity include the capsid protein of the West Nile virus and the catalytic subunit of the Telomerase ribonucleoprotein. This protein controls cell cycle arrest and Apoptosis by regulating p21, a cell cycle regulator, and the tumor suppressor protein p53. Pseudogenes of this gene are present on chromosomes 1, 3, 9, 12 and 20, and on the X chromosome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Apr 2014]

MKRN1 基因产物(3)

mRNA Protein Name
NM_001145125.2 NP_001138597.1 E3 ubiquitin-protein ligase makorin-1 isoform 2
NM_001291663.2 NP_001278592.1 E3 ubiquitin-protein ligase makorin-1 isoform 3
NM_013446.4 NP_038474.2 E3 ubiquitin-protein ligase makorin-1 isoform 1
基因本体论
  • 分子功能
  • 生物过程
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
19536131 GOA
enables ubiquitin protein ligase activity IDA
IDA: 通过直接分析推断
19536131 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in protein polyubiquitination IDA
IDA: 通过直接分析推断
19536131 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

MKRN1 蛋白结构

zf-CCCH

zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (57 - 80)

zf-CCCH

zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (88 - 110)

zf-CCCH

zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar) (210 - 233)

zf-C3HC4

zf-C3HC4: Zinc finger, C3HC4 type (RING finger) (281 - 334)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 482 a.a.
蛋白主名 其他名称

E3 ubiquitin-protein ligase makorin-1

RING finger protein 61

MKRN1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra MKRN1 Q9UHC7 BYSL Homo sapiens Q13895
Y2H Array
32296183
Intra MKRN1 Q9UHC7 TP53 Homo sapiens P04637
Anti Tag CoIP
19536131
Intra MKRN1 Q9UHC7 CDKN1A Homo sapiens P38936
Anti Tag CoIP
19536131
Intra MKRN1 Q9UHC7 UBE2D4 Homo sapiens Q9Y2X8
Validated Y2H
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
West Nile Virus

West Nile Virus, Susceptibility To

Wnv

Wnv, Susceptibility To

West Nile Viral Infection

Encephalitis, West Nile Fever

West Nile Fever

Cerebellar Astrocytoma

Astrocytoma Of Cerebellum

Pilomyxoid Astrocytoma
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus MKRN1 RGD RGD:1303251
Mus musculus MKRN1 MGD MGI:1859353
Bos taurus MKRN1 VGNC VGNC:107229
Macaca mulatta MKRN1 VGNC VGNC:81476
Felis catus MKRN1 VGNC VGNC:80625