1. Gene
  2. CLIP3 - CAP-Gly domain containing linker protein 3 Gene

CLIP3 - CAP-Gly domain containing linker protein 3 Gene

中文名称:含 CAP-Gly 结构域的连接蛋白 3

种属: Homo sapiens

同用名: RSNL1; CLIPR59; CLIPR-59

基因 ID: 25999 | 基因类型: protein coding

关于 CLIP3

Cytogenetic location: 19q13.12 Genomic coordinates (GRCh38): 19:36,014,660-36,032,873 (from NCBI)

This gene has 6 transcripts (splice variants), 181 orthologues and 4 paralogues. Biased expression in brain (RPKM 97.6), endometrium (RPKM 19.6) and 9 other tissues.

功能概要

该基因编码细胞质连接蛋白 170 家族的成员。该蛋白质家族的成员包含一个细胞骨架相关蛋白富含甘氨酸的结构域,并介导微管与细胞器的相互作用。编码的蛋白质通过促进微管蛋白与脂筏神经节苷脂 GD3 的结合而在 T 细胞凋亡中发挥作用。编码的蛋白质还充当支架蛋白,介导磷酸化蛋白激酶 B 的膜定位。已经观察到该基因的选择性剪接转录变体。[RefSeq 提供,2010 年 12 月]

This gene encodes a member of the cytoplasmic linker protein 170 family. Members of this protein family contain a cytoskeleton-associated protein glycine-rich domain and mediate the interaction of microtubules with cellular organelles. The encoded protein plays a role in T cell Apoptosis by facilitating the association of tubulin and the lipid raft ganglioside GD3. The encoded protein also functions as a scaffold protein mediating membrane localization of phosphorylated protein kinase B. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Dec 2010]

CLIP3 基因产物(2)

mRNA Protein Name
NM_001199570.2 NP_001186499.1 CAP-Gly domain-containing linker protein 3
NM_015526.3 NP_056341.1 CAP-Gly domain-containing linker protein 3
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables ganglioside binding IDA
IDA: 通过直接分析推断
20052288 GOA
enables microtubule binding IDA
IDA: 通过直接分析推断
15262990 GOA
enables microtubule binding IMP
IMP: 通过突变表型推断
20052288 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
26198635 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in membrane biogenesis IMP
IMP: 通过突变表型推断
11854307 GOA
involved in negative regulation of microtubule polymerization IMP
IMP: 通过突变表型推断
15262990 GOA
involved in peptidyl-L-cysteine S-palmitoylation IMP
IMP: 通过突变表型推断
15262990 GOA
involved in positive regulation of apoptotic process IMP
IMP: 通过突变表型推断
20052288 GOA
involved in positive regulation of endocytosis IMP
IMP: 通过突变表型推断
11854307 GOA
involved in protein transport along microtubule IMP
IMP: 通过突变表型推断
20052288 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in early endosome membrane IDA
IDA: 通过直接分析推断
11854307 GOA
located in membrane raft IDA
IDA: 通过直接分析推断
15262990 GOA
located in plasma membrane IDA
IDA: 通过直接分析推断
19139280 GOA
located in plasma membrane IMP
IMP: 通过突变表型推断
15262990 GOA
located in recycling endosome membrane IDA
IDA: 通过直接分析推断
11854307 GOA
located in trans-Golgi network membrane IDA
IDA: 通过直接分析推断
11854307 GOA
located in trans-Golgi network membrane IMP
IMP: 通过突变表型推断
15262990 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

CLIP3 蛋白结构

Ank_2

Ank_2: Ankyrin repeats (3 copies) (144 - 228)

CAP_GLY

CAP_GLY: CAP-Gly domain (296 - 360)

CAP_GLY

CAP_GLY: CAP-Gly domain (418 - 482)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 547 a.a.
蛋白主名 其他名称

CAP-Gly domain-containing linker protein 3

CLIP-170-related 59 kDa protein

CLIP3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra CLIP3 Q96DZ5 KIF1B Homo sapiens O60333-2
Y2H Pooling
32814053
Intra CLIP3 Q96DZ5 KIF1B Homo sapiens O60333-2
Validated Y2H
32814053
Intra CLIP3 Q96DZ5 KIF1B Homo sapiens O60333-2
Y2H Array
32814053
Intra CLIP3 Q96DZ5 CEP83 Homo sapiens Q9Y592-2
Validated Y2H
32296183
Intra CLIP3 Q96DZ5 HSPB1 Homo sapiens P04792
Validated Y2H
32814053
Intra CLIP3 Q96DZ5 HSPB1 Homo sapiens P04792
Y2H Array
32814053
Intra CLIP3 Q96DZ5 HSPB1 Homo sapiens P04792
Y2H Pooling
32814053
Intra CLIP3 Q96DZ5 GOLGA2 Homo sapiens Q08379
Y2H Prey Pooling
32296183
Intra CLIP3 Q96DZ5 GOLGA2 Homo sapiens Q08379
Y2H Array
32296183
Intra CLIP3 Q96DZ5 WFS1 Homo sapiens O76024
Validated Y2H
32814053
Intra CLIP3 Q96DZ5 WFS1 Homo sapiens O76024
Y2H Array
32814053
Intra CLIP3 Q96DZ5 WFS1 Homo sapiens O76024
Y2H Pooling
32814053
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Felis catus CLIP3 VGNC VGNC:97383
Mus musculus CLIP3 MGD MGI:1923936
Macaca mulatta CLIP3 VGNC VGNC:109601
Bos taurus CLIP3 VGNC VGNC:27446
Rattus norvegicus CLIP3 RGD RGD:1306245
Canis familiaris CLIP3 VGNC VGNC:39344