1. Gene
  2. NUFIP1 - nuclear FMR1 interacting protein 1 Gene

NUFIP1 - nuclear FMR1 interacting protein 1 Gene

中文名称:核 FMR1 相互作用蛋白 1

种属: Homo sapiens

同用名: Rsa1; NUFIP; bA540M5.1

基因 ID: 26747 | 基因类型: protein coding

关于 NUFIP1

Cytogenetic location: 13q14.12 Genomic coordinates (GRCh38): 13:44,939,249-44,989,471 (from NCBI)

This gene has 1 transcript (splice variant) and 195 orthologues. Ubiquitous expression in testis (RPKM 3.6), brain (RPKM 2.9) and 25 other tissues.

功能概要

该基因编码含有 C2H2 锌指基序和核定位信号的核 RNA 结合蛋白。这种蛋白质与染色质周围原纤维中的核基质相关,并且在神经元中,与内质网核糖体相关联地定位于细胞质。该蛋白与脆性 X 智力低下蛋白 (FMRP) 、肿瘤抑制蛋白 BRCA1 相互作用,上调 RNA 聚合酶 II 转录,并参与 box C/D snoRNP 生物合成。该基因的假基因位于染色体 6q12 上。[RefSeq 提供,2012 年 2 月]

This gene encodes a nuclear RNA binding protein that contains a C2H2 zinc finger motif and a nuclear localization signal. This protein is associated with the nuclear matrix in perichromatin fibrils and, in neurons, localizes to the cytoplasm in association with endoplasmic reticulum ribosomes. This protein interacts with the fragile X mental retardation protein (FMRP), the tumor suppressor protein BRCA1, upregulates RNA polymerase II transcription, and is involved in box C/D snoRNP biogenesis. A pseudogene of this gene resides on chromosome 6q12. [provided by RefSeq, Feb 2012]

NUFIP1 基因产物(1)

mRNA Protein Name
NM_012345.3 NP_036477.2 FMR1-interacting protein NUFIP1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables ATPase binding IPI
IPI: 通过物理相互作用推断
17636026 GOA
NOT enables DNA binding IDA
IDA: 通过直接分析推断
15107825 GOA
enables RNA binding IDA
IDA: 通过直接分析推断
10556305 GOA
enables identical protein binding IPI
IPI: 通过物理相互作用推断
17636026 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
10556305 GOA
enables protein-macromolecule adaptor activity IPI
IPI: 通过物理相互作用推断
17636026 GOA
contributes to snoRNA binding IDA
IDA: 通过直接分析推断
17636026 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in box C/D snoRNP assembly IMP
IMP: 通过突变表型推断
17636026 GOA
involved in positive regulation of transcription by RNA polymerase II IMP
IMP: 通过突变表型推断
15107825 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in nuclear matrix IDA
IDA: 通过直接分析推断
12941608 GOA
located in nucleolus IDA
IDA: 通过直接分析推断
12941608 GOA
located in perichromatin fibrils IDA
IDA: 通过直接分析推断
12941608 GOA
part of pre-snoRNP complex IDA
IDA: 通过直接分析推断
17636026 GOA
part of protein-containing complex IDA
IDA: 通过直接分析推断
17636026 GOA
part of transcription elongation factor complex IDA
IDA: 通过直接分析推断
15107825 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

NUFIP1 蛋白结构

zf-C2H2_jaz

zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding (174 - 195)

NUFIP1

NUFIP1: Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) (213 - 268)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 495 a.a.
蛋白主名 其他名称

FMR1-interacting protein NUFIP1

NUFIP1, FMR1 interacting protein 1

NUFIP1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属间
NUFIP1 Q9UHK0 Ruvbl1 Mus musculus P60122 17636026
种属内
NUFIP1 Q9UHK0 ZNHIT6 Homo sapiens Q9NWK9 17636026
种属内
NUFIP1 Q9UHK0 ZNHIT6 Homo sapiens Q9NWK9 33961781
种属内
NUFIP1 Q9UHK0 ZNHIT3 Homo sapiens Q15649 25170085
种属内
NUFIP1 Q9UHK0 ZNHIT3 Homo sapiens Q15649 33961781
种属内
NUFIP1 Q9UHK0 ZNHIT3 Homo sapiens Q15649 28514442
种属内
NUFIP1 Q9UHK0 NOP58 Homo sapiens Q9Y2X3 17636026
种属内
NUFIP1 Q9UHK0 SNU13 Homo sapiens P55769 17636026
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Peho Syndrome

Progressive Encephalopathy With Edema, Hypsarrhythmia, And Optic Atrophy

Infantile Cerebellooptic Atrophy

PEHO

Progressive Encephalopathy With Edema, Hypsarrhythmia And Optic Atrophy

Progressive Encephalopathy-Optic Atrophy Syndrome

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Felis catus NUFIP1 VGNC VGNC:68593
Bos taurus NUFIP1 VGNC VGNC:32345
Canis familiaris NUFIP1 VGNC VGNC:44039
Mus musculus NUFIP1 MGD MGI:1351474
Macaca mulatta NUFIP1 VGNC VGNC:106279
Rattus norvegicus NUFIP1 RGD RGD:1359440