1. Gene
  2. PAFAH1B3 - platelet activating factor acetylhydrolase 1b catalytic subunit 3 Gene

PAFAH1B3 - platelet activating factor acetylhydrolase 1b catalytic subunit 3 Gene

中文名称:血小板活化因子乙酰水解酶 1b 催化亚基 3

种属: Homo sapiens

同用名: PAFAHG

基因 ID: 5050 | 基因类型: protein coding

关于 PAFAH1B3

Cytogenetic location: 19q13.2 Genomic coordinates (GRCh38): 19:42,297,033-42,302,800 (from NCBI)

This gene has 8 transcripts (splice variants), 208 orthologues and 2 paralogues. Ubiquitous expression in testis (RPKM 7.8), brain (RPKM 7.2) and 25 other tissues.

功能概要

该基因编码乙酰水解酶,催化乙酰基从血小板活化因子的甘油主链上去除。编码的酶是血小板活化因子乙酰水解酶亚型 1B 复合物的一个亚基,它由催化性 β 和 γ 亚基以及调节性 α 亚基组成。这种复杂的功能在大脑发育中发挥作用。已经观察到 19 号染色体上的该基因与 1 号染色体上的 CDC 样激酶 2 基因之间的易位,并且与认知障碍、共济失调和大脑萎缩有关。已经描述了选择性剪接的转录物变体。[RefSeq 提供,2009 年 3 月]

This gene encodes an acetylhydrolase that catalyzes the removal of an acetyl group from the glycerol backbone of platelet-activating factor. The encoded Enzyme is a subunit of the platelet-activating factor acetylhydrolase isoform 1B complex, which consists of the catalytic beta and gamma subunits and the regulatory alpha subunit. This complex functions in brain development. A translocation between this gene on chromosome 19 and the CDC-like kinase 2 gene on chromosome 1 has been observed, and was associated with cognitive disability, ataxia, and atrophy of the brain. Alternatively spliced transcript variants have been described. [provided by RefSeq, Mar 2009]

PAFAH1B3 基因产物(3)

mRNA Protein Name
NM_001145939.2 NP_001139411.1 platelet-activating factor acetylhydrolase IB subunit alpha1
NM_001145940.1 NP_001139412.1 platelet-activating factor acetylhydrolase IB subunit alpha1
NM_002573.4 NP_002564.1 platelet-activating factor acetylhydrolase IB subunit alpha1
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables identical protein binding IPI
IPI: 通过物理相互作用推断
16189514 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
16189514 GOA
enables protein heterodimerization activity IDA
IDA: 通过直接分析推断
10542206 GOA
enables protein homodimerization activity IDA
IDA: 通过直接分析推断
10542206 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

PAFAH1B3 蛋白结构

Lipase_GDSL_2

Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family (42 - 201)

  • 0
  • 100
  • 200
  • 231 a.a.
蛋白主名 其他名称

platelet-activating factor acetylhydrolase IB subunit alpha1

PAF acetylhydrolase 29 kDa subunit

PAFAH1B3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra PAFAH1B3 Q15102 MEI4 Homo sapiens A8MW99
Y2H Prey Pooling
32296183
Intra PAFAH1B3 Q15102 MEI4 Homo sapiens A8MW99
Y2H Array
32296183
Intra PAFAH1B3 Q15102 LNX1 Homo sapiens Q8TBB1
Pull Down
16189514
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
Y2H
21516116
Intra PAFAH1B3 Q15102 LNX1 Homo sapiens Q8TBB1
Y2H Pooling
16189514
Intra PAFAH1B3 Q15102 SDCBP2 Homo sapiens Q9H190
Y2H Array
31515488
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
MAPPIT
32296183
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
Y2H Prey Pooling
32296183
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
Validated Y2H
32296183
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
Y2H Array
25416956
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
Complementation
32296183
Intra PAFAH1B3 Q15102 LNX1 Homo sapiens Q8TBB1
Validated Y2H
32296183
Intra PAFAH1B3 Q15102 PAFAH1B2 Homo sapiens P68402
Anti Tag CoIP
33961781
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
Y2H Array
32296183
Intra PAFAH1B3 Q15102 LNX1 Homo sapiens Q8TBB1
Y2H Prey Pooling
32296183
Intra PAFAH1B3 Q15102 LNX1 Homo sapiens Q8TBB1
Y2H Array
32296183
Intra PAFAH1B3 Q15102 PAFAH1B3 Homo sapiens Q15102
Y2H Pooling
16189514
Intra PAFAH1B3 Q15102 LNX1 Homo sapiens Q8TBB1
Y2H Array
29892012
Intra PAFAH1B3 Q15102 SDCBP2 Homo sapiens Q9H190
Y2H Pooling
16189514
Intra PAFAH1B3 Q15102 PAFAH1B1 Homo sapiens P43034
Anti Tag CoIP
33961781
Intra PAFAH1B3 Q15102 PAFAH1B1 Homo sapiens P43034
Anti Tag CoIP
28514442
Intra PAFAH1B3 Q15102 NIF3L1 Homo sapiens Q9GZT8
Y2H Prey Pooling
32296183
Intra PAFAH1B3 Q15102 NIF3L1 Homo sapiens Q9GZT8
Validated Y2H
32296183
Intra PAFAH1B3 Q15102 NIF3L1 Homo sapiens Q9GZT8
Y2H Array
32296183
Intra PAFAH1B3 Q15102 SDCBP2 Homo sapiens Q9H190
Y2H Prey Pooling
32296183
Intra PAFAH1B3 Q15102 SDCBP2 Homo sapiens Q9H190
Validated Y2H
32296183
Intra PAFAH1B3 Q15102 SDCBP2 Homo sapiens Q9H190
Y2H Array
32296183
Intra PAFAH1B3 Q15102 PICK1 Homo sapiens Q9NRD5
Y2H Prey Pooling
32296183
Intra PAFAH1B3 Q15102 PICK1 Homo sapiens Q9NRD5
Validated Y2H
32296183
Intra PAFAH1B3 Q15102 PICK1 Homo sapiens Q9NRD5
Y2H Array
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Lissencephaly

Pachygyria

Broad Gyri Of Cerebrum

Large Gyri Of Cerebrum

Macrogyria

Miller-Dieker Lissencephaly Syndrome

Miller-Dieker Syndrome

Mds

MDLS

Miller Dieker Syndrome

Classical Lissencephaly Syndrome

Lissencephaly Due To 17p13.3 Deletion

Monosomy 17p13.3

Telomeric Deletion 17p

Classical Lissencephaly

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus PAFAH1B3 RGD RGD:620333
Canis familiaris PAFAH1B3 VGNC VGNC:44240
Felis catus PAFAH1B3 VGNC VGNC:103738
Mus musculus PAFAH1B3 MGD MGI:108414
Bos taurus PAFAH1B3 VGNC VGNC:32551