1. Gene
  2. SPTBN4 - spectrin beta, non-erythrocytic 4 Gene

SPTBN4 - spectrin beta, non-erythrocytic 4 Gene

中文名称:spectrin beta,非红细胞 4

种属: Homo sapiens

同用名: QV; CMND; SPNB4; NEDHND; SPTBN3

基因 ID: 57731 | 基因类型: protein coding

关于 SPTBN4

Cytogenetic location: 19q13.2 Genomic coordinates (GRCh38): 19:40,467,001-40,576,464 (from NCBI)

This gene has 12 transcripts (splice variants), 274 orthologues, 36 paralogues and is associated with 2 phenotypes. Biased expression in brain (RPKM 4.1), testis (RPKM 0.9) and 9 other tissues.

功能概要

Spectrin 是一种肌动蛋白交联和分子支架蛋白,可将质膜连接到肌动蛋白细胞骨架,并在确定细胞形状、跨膜蛋白排列和细胞器组织中发挥作用。它由两个反平行的α-和β-亚基二聚体组成。该基因是 β-血影蛋白基因家族的一员。编码的蛋白质定位于核基质、PML 核体和细胞质囊泡。神经元极化区域中的特定膜蛋白定位需要小鼠中高度相似的基因。已发现该基因编码不同异构体的多个转录变体。[RefSeq 提供,2008 年 7 月]

Spectrin is an actin crosslinking and molecular scaffold protein that links the plasma membrane to the actin Cytoskeleton, and functions in the determination of cell shape, arrangement of transmembrane proteins, and organization of organelles. It is composed of two antiparallel dimers of alpha- and beta- subunits. This gene is one member of a family of beta-spectrin genes. The encoded protein localizes to the nuclear matrix, PML nuclear bodies, and cytoplasmic vesicles. A highly similar gene in the mouse is required for localization of specific membrane proteins in polarized regions of neurons. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

SPTBN4 基因产物(2)

mRNA Protein Name
NM_020971.3 NP_066022.2 spectrin beta chain, non-erythrocytic 4 isoform sigma1
NM_025213.3 NP_079489.2 spectrin beta chain, non-erythrocytic 4 isoform sigma5
基因本体论
  • 分子功能
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables ankyrin binding IDA
IDA: 通过直接分析推断
11294830 GOA
enables phosphatase binding IPI
IPI: 通过物理相互作用推断
11086001 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
11086001 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in PML body IDA
IDA: 通过直接分析推断
11294830 GOA
located in cytoplasm IDA
IDA: 通过直接分析推断
11294830 GOA
located in membrane IDA
IDA: 通过直接分析推断
11086001 GOA
located in nuclear matrix IDA
IDA: 通过直接分析推断
11294830 GOA
part of spectrin IDA
IDA: 通过直接分析推断
11086001 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SPTBN4 蛋白结构

CH

CH: Calponin homology (CH) domain (64 - 165)

CH

CH: Calponin homology (CH) domain (183 - 284)

Spectrin

Spectrin: Spectrin repeat (311 - 418)

Spectrin

Spectrin: Spectrin repeat (430 - 533)

Spectrin

Spectrin: Spectrin repeat (536 - 641)

Spectrin

Spectrin: Spectrin repeat (774 - 879)

Spectrin

Spectrin: Spectrin repeat (884 - 982)

Spectrin

Spectrin: Spectrin repeat (1089 - 1196)

Spectrin

Spectrin: Spectrin repeat (1306 - 1407)

Spectrin

Spectrin: Spectrin repeat (1412 - 1512)

Spectrin

Spectrin: Spectrin repeat (1516 - 1617)

Spectrin

Spectrin: Spectrin repeat (1623 - 1725)

Spectrin

Spectrin: Spectrin repeat (1728 - 1830)

Spectrin

Spectrin: Spectrin repeat (1835 - 1935)

Spectrin

Spectrin: Spectrin repeat (1944 - 2046)

Spectrin

Spectrin: Spectrin repeat (2049 - 2123)

PH_9

PH_9: Pleckstrin homology domain (2421 - 2522)

  • 0
  • 400
  • 800
  • 1200
  • 1600
  • 2000
  • 2400
  • 2564 a.a.
蛋白主名 其他名称

spectrin beta chain, non-erythrocytic 4

beta-IV spectrin

SPTBN4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SPTBN4 Q9H254 DISC1 Homo sapiens Q9NRI5
Anti Tag CoIP
12812986
种属内
SPTBN4 Q9H254 DISC1 Homo sapiens Q9NRI5
Y2H
12812986
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Neurodevelopmental Disorder With Hypotonia, Neuropathy, And Deafness

NEDHND

Myopathy, Congenital, With Neuropathy And Deafness

Cmnd

Spinocerebellar Ataxia 5

Spinocerebellar Ataxia Type 5

SCA5

Spinocerebellar Ataxia-5

Ataxia, Spinocerebellar, Type 5

Developmental And Epileptic Encephalopathy 5

Epileptic Encephalopathy, Early Infantile, 5

DEE5

Eiee5

Developmental And Epileptic Encephalopathy, 5

Early Infantile Epileptic Encephalopathy 5

Encephalopathy, Epileptic, Early Infantile, Type 5

Spinocerebellar Ataxia, Autosomal Recessive 8

Arca1

Autosomal Recessive Cerebellar Ataxia Type 1

SCAR8

Autosomal Recessive Spinocerebellar Ataxia 8

Autosomal Recessive Ataxia, Beauce Type

Recessive Ataxia Of Beauce

Syne1-Related Autosomal Recessive Cerebellar Ataxia

Ataxia, Recessive, Of Beauce

Cerebellar Ataxia, Autosomal Recessive, Type 1

Spinocerebellar Ataxia Autosomal Recessive 8

Autosomal Recessive Ataxia Beauce Type

Spinocerebellar Ataxia, Autosomal Recessive, 8

Ataxia Recessive Of Beauce

Ataxia, Spinocerebellar, Autosomal Recessive, Type 8

Hypotonia
Myopathy

Muscular Diseases

Myopathies

Charcot-Marie-Tooth Disease And Deafness

Charcot-Marie-Tooth Disease Type 1e

CMT1E

Charcot-Marie-Tooth Disease Type 1

Hereditary Motor And Sensory Neuropathy Type 1

Charcot-Marie-Tooth Disease, Demyelinating, Type 1e

Charcot-Marie-Tooth Disease, Type I

Charcot-Marie-Tooth Neuropathy And Deafness, Autosomal Dominant

Charcot-Marie-Tooth Disease, Type 1e

Charcot-Marie-Tooth Disease Demyelinating Type 1e

Autosomal Dominant Demyelinating Charcot-Marie-Tooth Disease

Cmt1

Charcot-Marie-Tooth Neuropathy Type 1

Autosomal Dominant Charcot-Marie-Tooth Neuropathy And Deafness

Charcot-Marie-Tooth Disease-Deafness

Charcot-Marie-Tooth Type 1

Hmsn1

Hereditary Motor And Sensory Neuropathy 1

Cmt 1e

Charcot Marie Tooth Disease Type 1e

Charcot-Marie-Tooth Disease-Deafness Syndrome

Charcot-Marie-Tooth Disease-Hearing Loss Syndrome

Charcot-Marie-Tooth Disease 1e

Charcot-Marie-Tooth Disease And Deafness Autosomal Dominant

Charcot-Marie-Tooth Neuropathy Type 1e

Charcot-Marie-Tooth Disease, Type Ie

Hereditary Motor And Sensory Neuropathy Type I

Brugada Syndrome

Sudden Unexpected Nocturnal Death Syndrome

Sudden Unexplained Nocturnal Death Syndrome

Bangungut

Brugada Type Idiopathic Ventricular Fibrillation

Pokkuri Death Syndrome

Sunds

Idiopathic Ventricular Fibrillation, Brugada Type

Sudden Unexplained Death

Dream Disease

Right Bundle Branch Block, St Segment Elevation, And Sudden Death Syndrome

Sudden Unexplained Death Syndrome

Suds

Sunds - [Sudden Unexplained Nocturnal Death Syndrome]

Early Infantile Epileptic Encephalopathy

Early Infantile Epileptic Encephalopathy With Burst-Suppression

Early Infantile Epileptic Encephalopathy With Suppression Bursts

Eiee

Early Infantile Epileptic Encephalopathy With Suppression-Bursts

Ohtahara Syndrome

Encephalopathy, Epileptic, Early Infantile

West Syndrome

Infantile Spasms

Infantile Spasms Syndrome

Infantile Spasm

X-Linked Infantile Spasm Syndrome

X-Linked Infantile Spasms

Epileptic Encephalopathy, Early Infantile, 1

Is

Tonic Spasms With Clustering, Arrest Of Psychomotor Development And Hypsarrhythmia On Eeg

West'S Syndrome

Spasms, Infantile

Is -[Infantile Spasm]

Salaam Spasm

Salaam Tic

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Felis catus SPTBN4 VGNC VGNC:65661
Bos taurus SPTBN4 VGNC VGNC:35254
Mus musculus SPTBN4 MGD MGI:1890574
Canis familiaris SPTBN4 VGNC VGNC:46777
Rattus norvegicus SPTBN4 RGD RGD:1304682