1. Gene
  2. PTPN13 - protein tyrosine phosphatase non-receptor type 13 Gene

PTPN13 - protein tyrosine phosphatase non-receptor type 13 Gene

中文名称:蛋白酪氨酸磷酸酶非受体 13 型

种属: Homo sapiens

同用名: PNP1; FAP-1; PTP1E; PTPL1; PTPLE; PTP-BL; hPTP1E; PTP-BAS

基因 ID: 5783 | 基因类型: protein coding

关于 PTPN13

Cytogenetic location: 4q21.3 Genomic coordinates (GRCh38): 4:86,594,315-86,815,161 (from NCBI)

This gene has 9 transcripts (splice variants), 208 orthologues, 35 paralogues and is associated with 98 phenotypes. Broad expression in skin (RPKM 27.0), ovary (RPKM 14.2) and 18 other tissues.

功能概要

该基因编码的蛋白质是蛋白酪氨酸磷酸酶 (PTP) 家族的成员。 PTP 是调节多种细胞过程的信号分子,包括细胞生长、分化、有丝分裂周期和致癌转化。该 PTP 是一种大的细胞内蛋白。它的 C 端有一个催化 PTP 结构域和两个主要结构域:一个区域有五个 PDZ 结构域,一个 FERM 结构域与质膜和细胞骨架元件结合。发现此 PTP 通过 PDZ 域与 Fas 受体和 IkappaBalpha 相互作用,并去磷酸化。这表明它在 Fas 介导的程序性细胞死亡中起作用。该 PTP 还显示与 GTPase 激活蛋白相互作用,因此可能作为 Rho 信号通路的调节剂发挥作用。已经报道了编码不同蛋白质的四种选择性剪接的转录物变体。[RefSeq 提供,2008 年 10 月]

The protein encoded by this gene is a member of the protein tyrosine Phosphatase (PTP) family. PTPs are signaling molecules that regulate a variety of cellular processes including cell growth, differentiation, mitotic cycle, and oncogenic transformation. This PTP is a large intracellular protein. It has a catalytic PTP domain at its C-terminus and two major structural domains: a region with five PDZ domains and a FERM domain that binds to plasma membrane and cytoskeletal elements. This PTP was found to interact with, and dephosphorylate, Fas receptor and IkappaBalpha through the PDZ domains. This suggests it has a role in Fas mediated programmed cell death. This PTP was also shown to interact with GTPase-activating protein, and thus may function as a regulator of Rho signaling pathways. Four alternatively spliced transcript variants, which encode distinct proteins, have been reported. [provided by RefSeq, Oct 2008]

PTPN13 基因产物(4)

mRNA Protein Name
NM_006264.3 NP_006255.1 tyrosine-protein phosphatase non-receptor type 13 isoform 2
NM_080683.3 NP_542414.1 tyrosine-protein phosphatase non-receptor type 13 isoform 1
NM_080684.3 NP_542415.1 tyrosine-protein phosphatase non-receptor type 13 isoform 3
NM_080685.3 NP_542416.1 tyrosine-protein phosphatase non-receptor type 13 isoform 4
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables phosphatidylinositol 3-kinase regulatory subunit binding IPI
IPI: 通过物理相互作用推断
23604317 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
10826496 GOA
enables protein tyrosine phosphatase activity IDA
IDA: 通过直接分析推断
14516276 GOA
enables protein tyrosine phosphatase activity IMP
IMP: 通过突变表型推断
23604317 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in negative regulation of protein phosphorylation IMP
IMP: 通过突变表型推断
25893857 GOA
involved in peptidyl-tyrosine dephosphorylation IMP
IMP: 通过突变表型推断
23604317 GOA
involved in protein dephosphorylation IDA
IDA: 通过直接分析推断
17657516 GOA
involved in regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction IDA
IDA: 通过直接分析推断
23604317 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in cytoplasm IDA
IDA: 通过直接分析推断
14516276 GOA
located in lamellipodium IDA
IDA: 通过直接分析推断
11356191 GOA
located in nucleus IDA
IDA: 通过直接分析推断
10826496 GOA
located in plasma membrane IDA
IDA: 通过直接分析推断
14516276 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

PTPN13 蛋白结构

FERM_N

FERM_N: FERM N-terminal domain (576 - 664)

FERM_M

FERM_M: FERM central domain (667 - 781)

FERM_C

FERM_C: FERM C-terminal PH-like domain (788 - 875)

PDZ

PDZ: PDZ domain (Also known as DHR or GLGF) (1094 - 1175)

PDZ

PDZ: PDZ domain (Also known as DHR or GLGF) (1369 - 1449)

PDZ

PDZ: PDZ domain (Also known as DHR or GLGF) (1502 - 1583)

PDZ

PDZ: PDZ domain (Also known as DHR or GLGF) (1789 - 1865)

PDZ

PDZ: PDZ domain (Also known as DHR or GLGF) (1889 - 1954)

Y_phosphatase

Y_phosphatase: Protein-tyrosine phosphatase (2237 - 2465)

  • 0
  • 400
  • 800
  • 1200
  • 1600
  • 2000
  • 2485 a.a.
蛋白主名 其他名称

tyrosine-protein phosphatase non-receptor type 13

fas-associated protein-tyrosine phosphatase 1

PTPN13 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
PTPN13 Q12923 RAPGEF6 Homo sapiens Q8TEU7
X-Ray Diffraction
12095257
种属内
PTPN13 Q12923 RAPGEF6 Homo sapiens Q8TEU7
NMR
14698303
种属内
PTPN13 Q12923 RAPGEF6 Homo sapiens Q8TEU7
ITC
17240990
种属内
PTPN13 Q12923 FAS Homo sapiens P25445
Anti Tag CoIP
12724420
种属内
PTPN13 Q12923 PDCD10 Homo sapiens Q9BUL8
Y2H
17657516
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Streptococcal Meningitis
Colorectal Cancer, Hereditary Nonpolyposis, Type 6

HNPCC6

Hereditary Nonpolyposis Colorectal Cancer Type 6

Colon Cancer, Hereditary Nonpolyposis, Type 6

Hereditary Non-Polyposis Colorectal Cancer 6

Cancer, Colorectal, Nonpolyposis, Hereditary, Type 6

Rectum Squamous Cell Carcinoma

Squamous Cell Carcinoma Of The Rectum

Rectal Squamous Cell Carcinoma

Squamous Carcinoma Of Rectum

Cerebral Cavernous Malformations

Cerebral Cavernous Malformation

Cavernous Malformations Of Cns And Retina

Cerebral Cavernous Malformation 1

Cavernous Angiomatous Malformations

Cerebral Capillary Malformations

CCM

Hyperkeratotic Cutaneous Capillary-Venous Malformations Associated With Cerebral Capillary Malformations

Familial Cavernous Angioma

Cavernous Angioma

Familial Cerebral Cavernous Malformation

Cerebral Cavernous Malformations 1

Cavernous Angioma, Familial

Cam

Cerebral Cavernous Malformations-1

Cavernoma

Central Nervous System Cavernous Hemangioma

Cerebral Cavernous Hemangioma

Familial Cavernous Hemangioma

Familial Cavernous Malformation

Familial Cerebral Cavernous Angioma

Intracerebral Cavernous Hemangioma

CCM1

Cavernous Hemangioma Of The Brain

Cerebral Cavernoma

Cerebral Cavernous Malformations, Type 1

Hemangioma, Cavernous, Central Nervous System

Hemangioma, Cavernous

Angioma, Cavernous

Colorectal Cancer, Hereditary Nonpolyposis, Type 4

HNPCC4

Hereditary Nonpolyposis Colorectal Cancer Type 4

Hereditary Non-Polyposis Colorectal Cancer 4

Cancer, Colorectal, Nonpolyposis, Hereditary, Type 4

Subacute Bacterial Endocarditis

Endocarditis Lenta

Sbe - Subacute Bacterial Endocarditis

Subacute Endocarditis, Lenta

Endocarditis, Subacute Bacterial

Colorectal Cancer

Colon Cancer

Colorectal Carcinoma

Colon Carcinoma

Colorectal Cancer, Susceptibility To

Carcinoma Of Colon

CRC

Colorectal Cancer With Chromosomal Instability, Somatic

Colon Cancer, Somatic

Colon Cancer, Susceptibility To

Colonic Neoplasms

Colorectal Neoplasms

Colorectal Cancer, Somatic

Colon Cancer, Advanced, Somatic

Colonic Carcinoma

Colorectal Carcinomas

Colon Cancers

Colorectal Cancers

Cancer, Colorectal, Somatic

Cancer, Colon

Cancer, Colorectal, Susceptibility To

Colorectal Neoplasm

Colonic Neoplasm

Malignant Tumor Of Colon

Lung Cancer

Lung Carcinoma

Non-Small Cell Lung Carcinoma

Lung Cancer, Susceptibility To

Lung Cancer, Protection Against

Adenocarcinoma Of Lung, Somatic

Adenocarcinoma Of Lung, Response To Tyrosine Kinase Inhibitor In

Nonsmall Cell Lung Cancer

Lung Neoplasm

Carcinoma Of Lung

Lung Non-Small Cell Carcinoma

Non-Small Cell Lung Cancer

Nsclc

Lung Neoplasms

Malignant Neoplasm Of Lung

Alveolar Cell Carcinoma

Nonsmall Cell Lung Cancer, Somatic

Nonsmall Cell Lung Cancer, Response To Tyrosine Kinase Inhibitor In

Nonsmall Cell Lung Cancer, Susceptibility To

Lung Cancer, Somatic

Lung Cancer, Resistance To

Cancer Of Lung

Cancer Of Bronchus

Cancer Of The Lung

Lung Malignancies

Lung Malignant Tumors

Malignant Lung Tumor

Malignant Tumor Of Lung

Pulmonary Cancer

Pulmonary Carcinoma

Pulmonary Neoplasms

Respiratory Carcinoma

LNCR

Adenocarcinoma Of Lung

Neoplasm Of Lung

Cancer Lung

Carcinoma Non-Small Cell Lung

Carcinoma, Non-Small-Cell Lung

Lung Cancers

Lung Carcinomas

Cancer, Lung

Cancer, Lung, Non-Small Cell

Primary Malignant Neoplasm Of Lung

Bronchioloalveolar Adenocarcinoma

Lynch Syndrome I

Lynch Syndrome 1

Colorectal Cancer, Hereditary Nonpolyposis, Type 1

HNPCC1

Fcc1

Lynch Syndrome Ii

Colon Cancer, Familial Nonpolyposis, Type 1

Coca1

Familial Nonpolyposis Colon Cancer Type 1

Hereditary Nonpolyposis Colorectal Cancer Type 1

Hereditary Non-Polyposis Colorectal Cancer 1

Hereditary Non-Polyposis Colorectal Cancer 3

Hnpcc3

Lynch Cancer Family Syndrome

Lynch Syndrome

Lynch Syndrome Type I

Lynch Syndrome Type Ii

Cancer, Colorectal, Nonpolyposis, Hereditary, Type 1

Hereditary Nonpolyposis Colorectal Cancer

Colorectal Cancer, Hereditary Nonpolyposis, Type 3

Hereditary Non-Polyposis Colon Cancer Type 2

Ovarian Cancer

Ovarian Carcinoma

Ovarian Neoplasm

Malignant Tumour Of Ovary

Cancer Of The Ovary

Epithelial Ovarian Cancer

Neoplasm Of Ovary

Ovarian Neoplasms

Ovarian Cancers

Malignant Neoplasm Of Ovary

Primary Malignant Neoplasm Of Ovary

Ovarian Cancer, Somatic

Malignant Ovarian Tumor

Ovary Neoplasm

Primary Ovarian Cancer

Tumor Of The Ovary

Malignant Neoplasm Of The Ovary

Malignant Tumor Of The Ovary

Ovarian Malignant Tumor

OC

Ovarian Carcinomas

Cancer, Ovarian

Cancer Of Ovary

Ovary Cancer

Ca Ovary

T-Cell Acute Lymphoblastic Leukemia

T-Cell Leukemia

Acute T Cell Leukemia

Precursor T Lymphoblastic Leukemia

Precursor T-Lymphoblastic Lymphoma/Leukemia

T Acute Lymphoblastic Leukemia

T-Cell Acute Lymphocytic Leukaemia

T-Cell Lymphoblastic Leukemia/Lymphoma

Leukemia T-Cell

Leukemia, T-Cell

Leukemia, Acute, Lymphoblastic, T-Cell

Leukemia, T-Cell Acute Lymphoblastic

Leukemia, Acute T-Cell

Precursor T-Cell Lymphoblastic Leukemia-Lymphoma

Precursor T-Cell Lymphoblastic Lymphoma

Precursor T Cell Lymphoblastic Leukemia/Lymphoblastic Lymphoma

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris PTPN13 VGNC VGNC:45170
Macaca mulatta PTPN13 VGNC VGNC:76599
Mus musculus PTPN13 MGD MGI:103293
Felis catus PTPN13 VGNC VGNC:69160
Bos taurus PTPN13 VGNC VGNC:53774
Rattus norvegicus PTPN13 RGD RGD:1563360