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  2. SRSF5 - serine and arginine rich splicing factor 5 Gene

SRSF5 - serine and arginine rich splicing factor 5 Gene

中文名称:富丝氨酸和精氨酸的剪接因子 5

种属: Homo sapiens

同用名: HRS; SFRS5; SRP40

基因 ID: 6430 | 基因类型: protein coding

关于 SRSF5

Cytogenetic location: 14q24.1 Genomic coordinates (GRCh38): 14:69,767,142-69,772,005 (from NCBI)

This gene has 19 transcripts (splice variants), 204 orthologues and 8 paralogues. Ubiquitous expression in bone marrow (RPKM 175.0), skin (RPKM 153.9) and 25 other tissues.

功能概要

由该基因编码的蛋白质是富含丝氨酸/精氨酸 (SR) 的 pre-mRNA 剪接因子家族的成员,它构成了剪接体的一部分。这些因子中的每一个都包含一个用于结合 RNA 的 RNA 识别基序 (RRM) 和一个用于结合其他蛋白质的 RS 结构域。 RS 结构域富含丝氨酸和精氨酸残基,可促进不同 SR 剪接因子之间的相互作用。除了对 mRNA 剪接至关重要外,SR 蛋白还显示参与 mRNA 从细胞核输出和翻译。可变剪接导致多个转录本变体。[RefSeq 提供,2016 年 2 月]

The protein encoded by this gene is a member of the serine/arginine (SR)-rich family of pre-mRNA splicing factors, which constitute part of the spliceosome. Each of these factors contains an RNA recognition motif (RRM) for binding RNA and an RS domain for binding Other proteins. The RS domain is rich in serine and arginine residues and facilitates interaction between different SR splicing factors. In addition to being critical for mRNA splicing, the SR proteins have also been shown to be involved in mRNA export from the nucleus and in translation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2016]

SRSF5 基因产物(4)

mRNA Protein Name
NM_001039465.2 NP_001034554.1 serine/arginine-rich splicing factor 5 isoform 1
NM_001320214.2 NP_001307143.1 serine/arginine-rich splicing factor 5 isoform 1
NM_001411040.1 NP_001397969.1 serine/arginine-rich splicing factor 5 isoform 2
NM_006925.5 NP_008856.2 serine/arginine-rich splicing factor 5 isoform 1
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
12762840 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SRSF5 蛋白结构

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (6 - 67)

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (110 - 175)

  • 0
  • 100
  • 200
  • 272 a.a.
蛋白主名 其他名称

serine/arginine-rich splicing factor 5

SR splicing factor 5

SRSF5 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SRSF5 Q13243 SRPK2 Homo sapiens P78362 33961781
种属内
SRSF5 Q13243 SRPK2 Homo sapiens P78362 23602568
种属内
SRSF5 Q13243 ZRSR2 Homo sapiens Q15696 32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Retinal Melanoma

Malignant Retinal Melanoma

Malignant Melanoma Of Retina

Aleutian Mink Disease

Aleutian Disease

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus SRSF5 VGNC VGNC:52831
Felis catus SRSF5 VGNC VGNC:65697
Macaca mulatta SRSF5 VGNC VGNC:99245
Mus musculus SRSF5 MGD MGI:98287
Canis familiaris SRSF5 VGNC VGNC:51690
Rattus norvegicus SRSF5 RGD RGD:3664