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  2. GPBP1 - GC-rich promoter binding protein 1 Gene

GPBP1 - GC-rich promoter binding protein 1 Gene

中文名称:富 GC 的启动子结合蛋白 1

种属: Homo sapiens

同用名: GPBP; SSH6; VASCULIN

基因 ID: 65056 | 基因类型: protein coding

关于 GPBP1

Cytogenetic location: 5q11.2 Genomic coordinates (GRCh38): 5:57,174,059-57,264,679 (from NCBI)

This gene has 9 transcripts (splice variants), 146 orthologues and 1 paralogue. Ubiquitous expression in testis (RPKM 33.9), ovary (RPKM 22.5) and 25 other tissues.

功能概要

该基因最初是通过对在具有血栓的动脉粥样硬化斑块中表达的 cDNA 进行消减杂交而分离出来的,并且发现它仅在血管平滑肌细胞中表达。然而,发现更短的剪接变体更普遍地表达。这种蛋白质被认为在动脉粥样硬化的发展中发挥作用。对小鼠的研究表明,它还可以作为富含 GC 的启动子特异性反式激活转录因子发挥作用。已经针对该基因描述了几种编码不同亚型的可变剪接转录物变体。[RefSeq 提供,2011 年 2 月]

This gene was originally isolated by subtractive hybridization of cDNAs expressed in atherosclerotic plaques with a thrombus, and was found to be expressed only in vascular smooth muscle cells. However, a shorter splice variant was found to be more ubiquitously expressed. This protein is suggested to play a role in the development of atherosclerosis. Studies in mice suggest that it may also function as a GC-rich promoter-specific trans-activating transcription factor. Several alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Feb 2011]

GPBP1 基因产物(5)

mRNA Protein Name
NM_001127235.2 NP_001120707.2 vasculin isoform 3
NM_001127236.2 NP_001120708.1 vasculin isoform 2
NM_001203246.2 NP_001190175.1 vasculin isoform 4
NM_001331037.2 NP_001317966.1 vasculin isoform 5
NM_022913.4 NP_075064.1 vasculin isoform 1
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
19060904 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

GPBP1 蛋白结构

Vasculin

Vasculin: Vascular protein family Vasculin-like 1 (374 - 471)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 473 a.a.
蛋白主名 其他名称

vasculin

vascular wall-linked protein

GPBP1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra GPBP1 Q86WP2 PRPF18 Homo sapiens Q99633
Validated Y2H
32296183
Intra GPBP1 Q86WP2 MCRS1 Homo sapiens Q96EZ8
Y2H Array
19060904
Intra GPBP1 Q86WP2 MCRS1 Homo sapiens Q96EZ8
Validated Y2H
32296183
Intra GPBP1 Q86WP2 MCRS1 Homo sapiens Q96EZ8
Y2H Pooling
19060904
Intra GPBP1 Q86WP2 NXF1 Homo sapiens Q9UBU9
Validated Y2H
32296183
Intra GPBP1 Q86WP2 PLEKHF2 Homo sapiens Q9H8W4
Y2H Prey Pooling
25416956
Intra GPBP1 Q86WP2 PLEKHF2 Homo sapiens Q9H8W4
Y2H Array
25416956
Intra GPBP1 Q86WP2 FNDC11 Homo sapiens Q9BVV2
Validated Y2H
32296183
Intra GPBP1 Q86WP2 FNDC11 Homo sapiens Q9BVV2
Y2H Array
25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Epilepsy, Idiopathic Generalized 17

Febrile Seizures, Familial, 2

EIG17

Familial Febrile Seizures 2

FEB2

Epilepsy, Idiopathic Generalized, Susceptibility To, 17

Familial Febrile Convulsions 2

Convulsions, Familial Febrile, 2

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta GPBP1 VGNC VGNC:73033
Bos taurus GPBP1 VGNC VGNC:29522
Felis catus GPBP1 VGNC VGNC:62660
Rattus norvegicus GPBP1 RGD RGD:1305492
Mus musculus GPBP1 MGD MGI:1920524
Canis familiaris GPBP1 VGNC VGNC:41370