1. Gene
  2. SSRP1 - structure specific recognition protein 1 Gene

SSRP1 - structure specific recognition protein 1 Gene

中文名称:结构特异性识别蛋白 1

种属: Homo sapiens

同用名: FACT; T160; FACT80

基因 ID: 6749 | 基因类型: protein coding

关于 SSRP1

Cytogenetic location: 11q12.1 Genomic coordinates (GRCh38): 11:57,325,988-57,335,892 (from NCBI)

This gene has 5 transcripts (splice variants), 232 orthologues and 20 paralogues. Ubiquitous expression in lymph node (RPKM 33.5), ovary (RPKM 32.7) and 25 other tissues.

功能概要

该基因编码的蛋白质是异二聚体的一个亚基,与 SUPT16H 一起形成染色质转录延长因子 FACT。 FACT 与组蛋白 H2A/H2B 特异性相互作用以影响核小体分解和转录延伸。事实和顺铂损伤的 DNA 可能对顺铂的抗癌机制至关重要。这种编码的蛋白质包含一个高迁移率组框,它很可能构成顺铂修饰 DNA 的结构识别元件。该蛋白质还充当转录激活因子 p63 的共激活因子。已经描述了该基因的可变剪接转录变体,但其全长性质尚不清楚。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is a subunit of a heterodimer that, along with SUPT16H, forms chromatin transcriptional elongation factor FACT. FACT interacts specifically with histones H2A/H2B to effect nucleosome disassembly and transcription elongation. FACT and cisplatin-damaged DNA may be crucial to the Anticancer mechanism of cisplatin. This encoded protein contains a high mobility group box which most likely constitutes the structure recognition element for cisplatin-modified DNA. This protein also functions as a co-activator of the transcriptional activator p63. An alternatively spliced transcript variant of this gene has been described, but its full-length nature is not known. [provided by RefSeq, Jul 2008]

SSRP1 基因产物(1)

mRNA Protein Name
NM_003146.3 NP_003137.1 FACT complex subunit SSRP1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
16902406 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in nucleosome disassembly IDA
IDA: 通过直接分析推断
16902406 GOA
involved in regulation of chromatin organization IDA
IDA: 通过直接分析推断
27467129 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of FACT complex IPI
IPI: 通过物理相互作用推断
16902406 GOA
located in nucleus IDA
IDA: 通过直接分析推断
9489704 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SSRP1 蛋白结构

SSrecog

SSrecog: Structure-specific recognition protein (SSRP1) (74 - 283)

Rtt106

Rtt106: Histone chaperone Rttp106-like (339 - 427)

HMG_box

HMG_box: HMG (high mobility group) box (547 - 615)

  • 0
  • 200
  • 400
  • 600
  • 709 a.a.
蛋白主名 其他名称

FACT complex subunit SSRP1

FACT 80 kDa subunit

SSRP1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SSRP1 Q08945 SUPT16H Homo sapiens Q9Y5B9 19214185
种属内
SSRP1 Q08945 SUPT16H Homo sapiens Q9Y5B9 33961781
种属内
SSRP1 Q08945 SUPT16H Homo sapiens Q9Y5B9 28514442
种属内
SSRP1 Q08945 SUPT16H Homo sapiens Q9Y5B9
TAP
24981860
种属内
SSRP1 Q08945 SUPT16H Homo sapiens Q9Y5B9 16902406
种属内
SSRP1 Q08945 SUPT16H Homo sapiens Q9Y5B9 35271311
种属内
SSRP1 Q08945 H2BC21 Homo sapiens Q16778 30021884
种属内
SSRP1 Q08945 H2BC21 Homo sapiens Q16778 35271311
种属内
SSRP1 Q08945 CSNK2A1 Homo sapiens P68400 28514442
种属内
SSRP1 Q08945 CSNK2A1 Homo sapiens P68400 35271311
种属内
SSRP1 Q08945 MCM7 Homo sapiens P33993 35271311
种属内
SSRP1 Q08945 MCM7 Homo sapiens P33993 28514442
种属内
SSRP1 Q08945 MCM2 Homo sapiens P49736
TAP
24981860
种属内
SSRP1 Q08945 MCM2 Homo sapiens P49736 28514442
种属内
SSRP1 Q08945 MCM2 Homo sapiens P49736 35271311
种属内
SSRP1 Q08945 MCM2 Homo sapiens P49736 16902406
种属内
SSRP1 Q08945 MCM6 Homo sapiens Q14566 35271311
种属内
SSRP1 Q08945 MCM6 Homo sapiens Q14566 16902406
种属内
SSRP1 Q08945 MCM6 Homo sapiens Q14566 28514442
种属内
SSRP1 Q08945 MCM4 Homo sapiens P33991 16902406
种属内
SSRP1 Q08945 MCM4 Homo sapiens P33991 28514442
种属内
SSRP1 Q08945 MCM4 Homo sapiens P33991 33961781
种属内
SSRP1 Q08945 MCM4 Homo sapiens P33991 16902406
种属内
SSRP1 Q08945 MCM4 Homo sapiens P33991 35271311
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Lupus Erythematosus

Lupus

Lupus Vulgaris

Lupus Erythematosus, Discoid

Lupus Erythematosus, Systemic

Subacute Cutaneous Lupus

Le - [Lupus Erythematosus]

Systemic Lupus Erythematosus

Lupus Nephritis

SLE

Disseminated Lupus Erythematosus

Systemic Lupus Erythematosus, Susceptibility To

Lupus Erythematosus, Systemic

Lupus Nephritis, Susceptibility To

Libman-Sacks Disease

Systemic Lupus Erythematosus Susceptibility To

Sle - Lupus Erythematosus, Systemic

Le Syndrome

Lupus

Lupus Erythematosus Systemic

Lupus Erythematosus, Systemic, Susceptibility To

Lupus Vulgaris

Lupus Erythematosus, Discoid

Lupus Erythematosus

Systemic Lupus Erythematosus Nos

Sle - [Systemic Lupus Erythematosus]

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus SSRP1 MGD MGI:107912
Felis catus SSRP1 VGNC VGNC:65710
Canis familiaris SSRP1 VGNC VGNC:46841
Rattus norvegicus SSRP1 RGD RGD:621143
Bos taurus SSRP1 VGNC VGNC:35323
Macaca mulatta SSRP1 VGNC VGNC:77891