1. Gene
  2. SUPT16H - SPT16 homolog, facilitates chromatin remodeling subunit Gene

SUPT16H - SPT16 homolog, facilitates chromatin remodeling subunit Gene

中文名称:SPT16 同系物,促进染色质重塑亚基

种属: Homo sapiens

同用名: CDC68; SPT16; NEDDFAC; FACTP140; SPT16/CDC68

基因 ID: 11198 | 基因类型: protein coding

关于 SUPT16H

Cytogenetic location: 14q11.2 Genomic coordinates (GRCh38): 14:21,351,476-21,384,019 (from NCBI)

This gene has 8 transcripts (splice variants), 202 orthologues and is associated with 2 phenotypes. Ubiquitous expression in testis (RPKM 30.8), lymph node (RPKM 27.6) and 25 other tissues.

功能概要

蛋白质编码基因的转录可以在裸露的 DNA 上重建,仅使用一般转录因子和 RNA 聚合酶 II。然而,这个最小系统不能转录包装成染色质的 DNA,这表明辅助因素可能有助于获取 DNA。其中一个因素 FACT (促进染色质转录) 特异性地与组蛋白 H2A/H2B 相互作用,以影响核小体分解和转录延伸。 FACT 由一个 80 kDa 亚基和一个 140 kDa 亚基组成;该基因编码 140 kDa 亚基。[RefSeq 提供,2009 年 2 月]

Transcription of protein-coding genes can be reconstituted on naked DNA with only the general transcription factors and RNA polymerase II. However, this minimal system cannot transcribe DNA packaged into chromatin, indicating that accessory factors may facilitate access to DNA. One such factor, FACT (facilitates chromatin transcription), interacts specifically with histones H2A/H2B to effect nucleosome disassembly and transcription elongation. FACT is composed of an 80 kDa subunit and a 140 kDa subunit; this gene encodes the 140 kDa subunit. [provided by RefSeq, Feb 2009]

SUPT16H 基因产物(1)

mRNA Protein Name
NM_007192.4 NP_009123.1 FACT complex subunit SPT16
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
16902406 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in nucleosome disassembly IDA
IDA: 通过直接分析推断
16902406 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of FACT complex IPI
IPI: 通过物理相互作用推断
16902406 GOA
located in nucleus IDA
IDA: 通过直接分析推断
9489704 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

SUPT16H 蛋白结构

FACT-Spt16_Nlob

FACT-Spt16_Nlob: FACT complex subunit SPT16 N-terminal lobe domain (5 - 167)

Peptidase_M24

Peptidase_M24: Metallopeptidase family M24 (182 - 411)

SPT16

SPT16: FACT complex subunit (SPT16/CDC68) (529 - 689)

Rtt106

Rtt106: Histone chaperone Rttp106-like (813 - 895)

  • 0
  • 200
  • 400
  • 600
  • 800
  • 1047 a.a.
蛋白主名 其他名称

FACT complex subunit SPT16

FACT 140 kDa subunit

SUPT16H 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
SUPT16H Q9Y5B9 SSRP1 Homo sapiens Q08945 30021884
种属内
SUPT16H Q9Y5B9 SSRP1 Homo sapiens Q08945 35271311
种属内
SUPT16H Q9Y5B9 SSRP1 Homo sapiens Q08945 16902406
种属内
SUPT16H Q9Y5B9 MCM4 Homo sapiens P33991 16902406
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Neurodevelopmental Disorder With Dysmorphic Facies And Thin Corpus Callosum

NEDDFAC

Autism Spectrum Disorder

Asd

Autism Spectrum Disorders

Autistic Continuum

Pervasive Developmental Disorder

Pervasive Development Disorder

Autistic Behavior

Autistic Disorder

Autistic

Autistic Disorder Of Childhood Onset

Infantile Autism

Childhood Autism

Kanner Syndrome

Pervasive Developmental Delay Nos

Pervasive Developmental Disorder, Not Otherwise Specified

Autism

Autistic Disorder

Autism Susceptibility 1

Childhood Autism

Autistic Disorder Of Childhood Onset

Infantile Autism

Kanner'S Syndrome

Autistic

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Felis catus SUPT16H VGNC VGNC:65846
Macaca mulatta SUPT16H VGNC VGNC:78054
Bos taurus SUPT16H VGNC VGNC:35478
Rattus norvegicus SUPT16H RGD RGD:1310032
Mus musculus SUPT16H MGD MGI:1890948
Canis familiaris SUPT16H VGNC VGNC:46989