1. Gene
  2. TAF11 - TATA-box binding protein associated factor 11 Gene

TAF11 - TATA-box binding protein associated factor 11 Gene

中文名称:TATA-box 结合蛋白相关因子 11

种属: Homo sapiens

同用名: TAF2I; PRO2134; TAFII28; MGC:15243

基因 ID: 6882 | 基因类型: protein coding

关于 TAF11

Cytogenetic location: 6p21.31 Genomic coordinates (GRCh38): 6:34,877,462-34,888,071 (from NCBI)

This gene has 12 transcripts (splice variants), 208 orthologues and 14 paralogues. Ubiquitous expression in testis (RPKM 12.6), bone marrow (RPKM 9.8) and 25 other tissues.

功能概要

RNA 聚合酶 II 启动转录需要 70 多种多肽的活性。协调这些活动的蛋白质是转录因子 IID (TFIID) ,它与核心启动子结合以正确定位聚合酶,充当组装转录复合物其余部分的支架,并充当调节信号的通道。 TFIID 由 TATA 结合蛋白 (TBP) 和一组称为 TBP 相关因子或 TAF 的进化保守蛋白组成。 TAF 可能参与基础转录,充当共激活因子,在启动子识别中发挥作用或修饰一般转录因子 (GTF) 以促进复杂的组装和转录起始。该基因编码 TFIID 的一个小亚基,该亚基存在于所有 TFIID 复合物中并与 TBP 相互作用。该亚基还与另一个小亚基 TAF13 相互作用,形成结构类似于组蛋白核心结构的异二聚体。已发现该基因的两个转录本变体编码不同的亚型。[RefSeq 提供,2012 年 7 月]

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes a small subunit of TFIID that is present in all TFIID complexes and interacts with TBP. This subunit also interacts with another small subunit, TAF13, to form a heterodimer with a structure similar to the histone core structure. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2012]

TAF11 基因产物(2)

mRNA Protein Name
NM_001270488.1 NP_001257417.1 transcription initiation factor TFIID subunit 11 isoform 2
NM_005643.4 NP_005634.1 transcription initiation factor TFIID subunit 11 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables TBP-class protein binding IPI
IPI: 通过物理相互作用推断
29111974 GOA
enables nuclear thyroid hormone receptor binding IPI
IPI: 通过物理相互作用推断
10744685 GOA
enables nuclear vitamin D receptor binding IPI
IPI: 通过物理相互作用推断
10744685 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
7729427 GOA
enables transcription coactivator activity IDA
IDA: 通过直接分析推断
8670810 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in RNA polymerase II preinitiation complex assembly IPI
IPI: 通过物理相互作用推断
27007846 GOA
involved in mRNA transcription by RNA polymerase II IDA
IDA: 通过直接分析推断
17884155 GOA
involved in positive regulation by host of viral transcription IDA
IDA: 通过直接分析推断
9108034 GOA
involved in positive regulation of transcription initiation by RNA polymerase II IDA
IDA: 通过直接分析推断
17884155 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in nucleus EXP
EXP: 通过实验结果推断
23332750 GOA
part of transcription factor TFIID complex IDA
IDA: 通过直接分析推断
7729427 GOA
part of transcription factor TFIID complex IPI
IPI: 通过物理相互作用推断
23332750 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TAF11 蛋白结构

TAFII28

TAFII28: hTAFII28-like protein conserved region (106 - 194)

  • 0
  • 100
  • 211 a.a.
蛋白主名 其他名称

transcription initiation factor TFIID subunit 11

TAF(II)28

TAF11 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
TAF11 Q15544 TAF13 Homo sapiens Q15543
X-Ray Diffraction
9695952
种属内
TAF11 Q15544 APPBP2 Homo sapiens Q92624
Validated Y2H
32296183
种属内
TAF11 Q15544 APPBP2 Homo sapiens Q92624
Y2H Prey Pooling
25416956
种属内
TAF11 Q15544 APPBP2 Homo sapiens Q92624
Y2H Prey Pooling
32296183
种属内
TAF11 Q15544 APPBP2 Homo sapiens Q92624
Y2H Array
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Facioscapulohumeral Muscular Dystrophy 1

Facioscapulohumeral Muscular Dystrophy

Fshd

Landouzy-Dejerine Muscular Dystrophy

Muscular Dystrophy, Facioscapulohumeral

FSHD1

Fshd1a

Muscular Dystrophy, Facioscapulohumeral, Type 1a

Facioscapulohumeral Muscular Dystrophy Type 1a

Fsh Muscular Dystrophy

Facioscapulohumeral Muscular Dystrophy 1a

Facioscapulohumeral Atrophy

Facioscapulohumeral Myopathy

Muscular Dystrophy, Facioscapulohumeral, Type 1

Facioscapulohumeral Muscular Dystrophy Type 1

Landouzy Dejerine Muscular Dystrophy

Muscular Dystrophy, Landouzy-Dejerine

Fshmd1a

Facio-Scapulo-Humeral Dystrophy

Facioscapulohumeral Type Progressive Muscular Dystrophy

Facioscapuloperoneal Muscular Dystrophy

Facioscapulohumeral Dystrophy

Fsh Dystrophy

Landouzy-Dejerine Dystrophy

Landouzy-Dejerine Myopathy

Fmd

Facioscapulohumeral Muscular Dystrophy-1a

Muscular Dystrophy Facioscapulohumeral

Dystrophy, Muscular, Facioscapulohumeral

Dystrophy, Muscular, Facioscapulohumeral, Type 1

Landouzy-Dejerine Disease

Landouzy-Déjerine Atrophy

Facioscapulohumeral Muscle Dystrophy

Fmd - [Facioscapulohumeral Muscular Dystrophy]

Fsh - [Facioscapulohumeral Muscular Dystrophy]

Fshd - [Facioscapulohumeral Muscular Dystrophy]

Landouzy-Déjerine Dystrophy Or Facioscapulohumeral Atrophy

Landouzy-Déjérine Muscular Dystrophy

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus TAF11 VGNC VGNC:54240
Macaca mulatta TAF11 VGNC VGNC:83477
Felis catus TAF11 VGNC VGNC:102529
Mus musculus TAF11 MGD MGI:1916026
Rattus norvegicus TAF11 RGD RGD:1305626
Canis familiaris TAF11 VGNC VGNC:47074