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  2. TAF12 - TATA-box binding protein associated factor 12 Gene

TAF12 - TATA-box binding protein associated factor 12 Gene

中文名称:TATA-box 结合蛋白相关因子 12

种属: Homo sapiens

同用名: TAF2J; TAFII20

基因 ID: 6883 | 基因类型: protein coding

关于 TAF12

Cytogenetic location: 1p35.3 Genomic coordinates (GRCh38): 1:28,602,850-28,648,269 (from NCBI)

This gene has 17 transcripts (splice variants) and 228 orthologues. Ubiquitous expression in testis (RPKM 9.9), lymph node (RPKM 8.4) and 25 other tissues.

功能概要

RNA 聚合酶 II 对转录的控制涉及作为蛋白质集合的基础转录机制。这些蛋白质与 RNA 聚合酶 II 组装成复合物,这些复合物由反式激活蛋白调节,反式激活蛋白与位于转录起始位点附近的顺式调节元件结合。一些调节剂直接与基础复合物相互作用,而其他调节剂可能充当连接反式激活因子和基础转录因子的桥接蛋白。这些相关因素中的一些与 TFIID 复合体中的 TBP 紧密相关,而其他因素则与 TFIID 复合体中的 TBP 紧密相关。后者包括 TAF 蛋白。预计不同的 TAF 会介导多种基因启动子和 RNA 聚合酶的不同转录激活因子的功能。 TAF12 直接与 TBP 以及 TAF2I 相互作用。已发现该基因编码相同蛋白质的两个转录变体。[RefSeq 提供,2008 年 9 月]

Control of transcription by RNA polymerase II involves the basal transcription machinery which is a collection of proteins. These proteins with RNA polymerase II, assemble into complexes which are modulated by transactivator proteins that bind to cis-regulatory elements located adjacent to the transcription start site. Some modulators interact directly with the basal complex, whereas Others may act as bridging proteins linking transactivators to the basal transcription factors. Some of these associated factors are weakly attached while Others are tightly associated with TBP in the TFIID complex. Among the latter are the TAF proteins. Different TAFs are predicted to mediate the function of distinct transcriptional activators for a variety of gene promoters and RNA polymerases. TAF12 interacts directly with TBP as well as with TAF2I. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Sep 2008]

TAF12 基因产物(3)

mRNA Protein Name
NM_001135218.2 NP_001128690.1 transcription initiation factor TFIID subunit 12 isoform 1
NM_001410769.1 NP_001397698.1 transcription initiation factor TFIID subunit 12 isoform 2
NM_005644.4 NP_005635.1 transcription initiation factor TFIID subunit 12 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables DNA binding IDA
IDA: 通过直接分析推断
15601843 GOA
enables DNA-binding transcription factor binding IDA
IDA: 通过直接分析推断
17264123 GOA
enables DNA-binding transcription factor binding IPI
IPI: 通过物理相互作用推断
17264123 GOA
contributes to RNA polymerase II general transcription initiation factor activity IDA
IDA: 通过直接分析推断
9603525 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
7667268 GOA
enables transcription coactivator activity IDA
IDA: 通过直接分析推断
11564863 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of SAGA complex IDA
IDA: 通过直接分析推断
9674425 GOA
located in nucleus EXP
EXP: 通过实验结果推断
23332750 GOA
located in nucleus IDA
IDA: 通过直接分析推断
11564863 GOA
part of transcription factor TFIID complex IDA
IDA: 通过直接分析推断
14580349 GOA
part of transcription factor TFIID complex IPI
IPI: 通过物理相互作用推断
23332750 GOA
part of transcription factor TFTC complex IDA
IDA: 通过直接分析推断
9603525 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TAF12 蛋白结构

TFIID_20kDa

TFIID_20kDa: Transcription initiation factor TFIID subunit A (59 - 126)

  • 0
  • 100
  • 161 a.a.
蛋白主名 其他名称

transcription initiation factor TFIID subunit 12

TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa

TAF12 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
TAF12 Q16514 PRKAR2B Homo sapiens Q6DHZ2
Y2H Array
25416956
种属内
TAF12 Q16514 PRKAR2B Homo sapiens Q6DHZ2
Y2H Prey Pooling
25416956
种属内
TAF12 Q16514 TAF4 Homo sapiens O00268
Anti Tag CoIP
33961781
种属内
TAF12 Q16514 TAF4 Homo sapiens O00268
X-Ray Diffraction
12237304
种属内
TAF12 Q16514 TAF4 Homo sapiens O00268
Anti Tag CoIP
35271311
种属内
TAF12 Q16514 TAF1C Homo sapiens Q15572
Anti Bait CoIP
17268553
种属内
TAF12 Q16514 TBP Homo sapiens P20226
Anti Tag CoIP
33961781
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Choroid Plexus Cancer

Choroid Plexus Carcinoma

Choroid Plexus Neoplasms

Choroid Plexus Neoplasm

Tumor Of Choroid Plexus

Tumor Of The Choroid Plexus

Choroid Plexus Tumor

Choroid Plexus Tumors

Anaplastic Choroid Plexus Papilloma

Choroid Plexus Papilloma Nos

Papilloma Of Choroid Plexus

Plexus Choroideus Papilloma

Choroid Plexus Papilloma In Fourth Ventricle

Plexus Choroideus Papilloma In Fourth Ventricle

Atypical Choroid Plexus Papilloma

Atypical Papilloma Of Choroid Plexus

Atypical Cpp

Cerebrovascular Benign Neoplasm
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Macaca mulatta TAF12 VGNC VGNC:106512
Felis catus TAF12 VGNC VGNC:65925
Bos taurus TAF12 VGNC VGNC:97316
Rattus norvegicus TAF12 RGD RGD:1592841
Mus musculus TAF12 MGD MGI:1913714