1. Gene
  2. TAF4 - TATA-box binding protein associated factor 4 Gene

TAF4 - TATA-box binding protein associated factor 4 Gene

中文名称:TATA-box 结合蛋白相关因子 4

种属: Homo sapiens

同用名: TAF2C; TAF4A; TAF2C1; TAFII130; TAFII135; TAFII-130; TAFII-135; TAF(II)130; TAF(II)135

基因 ID: 6874 | 基因类型: protein coding

关于 TAF4

Cytogenetic location: 20q13.33 Genomic coordinates (GRCh38): 20:61,974,798-62,065,881 (from NCBI)

This gene has 10 transcripts (splice variants), 1 gene allele, 250 orthologues and 1 paralogue. Ubiquitous expression in testis (RPKM 7.8), ovary (RPKM 4.5) and 25 other tissues.

功能概要

RNA 聚合酶 II 启动转录需要 70 多种多肽的活性。协调这些活动的蛋白质是转录因子 IID (TFIID) ,它与核心启动子结合以正确定位聚合酶,充当组装转录复合物其余部分的支架,并充当调节信号的通道。 TFIID 由 TATA 结合蛋白 (TBP) 和一组称为 TBP 相关因子或 TAF 的进化保守蛋白组成。 TAF 可能参与基础转录,充当共激活因子,在启动子识别中发挥作用或修饰一般转录因子 (GTF) 以促进复杂的组装和转录起始。该基因编码 TFIID 的较大亚基之一,该亚基已被证明可增强视黄酸、甲状腺激素和维生素 D3 受体的转录激活。此外,该亚基与具有富含谷氨酰胺激活结构域的转录因子 CREB 相互作用,并与其他含有富含谷氨酰胺区域的蛋白质结合。具有扩展的聚谷氨酰胺区域的蛋白质与该亚基的异常结合已被认为是一组称为聚谷氨酰胺疾病的神经退行性疾病的发病机制之一。[RefSeq 提供,2008 年 7 月]

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the larger subunits of TFIID that has been shown to potentiate transcriptional activation by retinoic acid, thyroid hormone and vitamin D3 receptors. In addition, this subunit interacts with the transcription factor CREB, which has a glutamine-rich activation domain, and binds to Other proteins containing glutamine-rich regions. Aberrant binding to this subunit by proteins with expanded polyglutamine regions has been suggested as one of the pathogenetic mechanisms underlying a group of neurodegenerative disorders referred to as polyglutamine diseases. [provided by RefSeq, Jul 2008]

TAF4 基因产物(1)

mRNA Protein Name
NM_003185.4 NP_003176.2 transcription initiation factor TFIID subunit 4
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
contributes to RNA polymerase II general transcription initiation factor activity IDA
IDA: 通过直接分析推断
9603525 GOA
enables aryl hydrocarbon receptor binding IPI
IPI: 通过物理相互作用推断
15641800 GOA
contributes to core promoter sequence-specific DNA binding IDA
IDA: 通过直接分析推断
15601843 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
7729427 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of MLL1 complex IDA
IDA: 通过直接分析推断
15960975 GOA
located in chromatin IDA
IDA: 通过直接分析推断
24289924 GOA
located in nucleus EXP
EXP: 通过实验结果推断
23332750 GOA
part of protein-containing complex IMP
IMP: 通过突变表型推断
15641800 GOA
part of transcription factor TFIID complex IDA
IDA: 通过直接分析推断
14580349 GOA
part of transcription factor TFIID complex IPI
IPI: 通过物理相互作用推断
23332750 GOA
part of transcription factor TFTC complex IDA
IDA: 通过直接分析推断
9603525 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

TAF4 蛋白结构

TAFH

TAFH: NHR1 homology to TAF (591 - 683)

TAF4

TAF4: Transcription initiation factor TFIID component TAF4 family (834 - 1083)

  • 0
  • 200
  • 400
  • 600
  • 800
  • 1000
  • 1085 a.a.
蛋白主名 其他名称

transcription initiation factor TFIID subunit 4

RNA polymerase II TBP-associated factor subunit C

TAF4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
TAF4 O00268 TAF12 Homo sapiens Q16514-1
Pull Down
23292512
种属内
TAF4 O00268 TAF12 Homo sapiens Q16514-1
Density Sedimentation
23292512
种属内
TAF4 O00268 TAF12 Homo sapiens Q16514-1
Ion Exchange Chrom
23292512
种属内
TAF4 O00268 TAF12 Homo sapiens Q16514-1
GMS
23292512
种属内
TAF4 O00268 CREB3 Homo sapiens O43889
ITC
17483474
种属内
TAF4 O00268 CREB3 Homo sapiens O43889
Pull Down
17483474
种属内
TAF4 O00268 CREBZF Homo sapiens Q9NS37
Pull Down
17483474
种属内
TAF4 O00268 CREBZF Homo sapiens Q9NS37
ITC
17483474
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Ovarian Endometrioid Stromal Sarcoma
Ovary Sarcoma

Sarcoma Of Ovary

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus TAF4 MGD MGI:2152346
Rattus norvegicus TAF4 RGD RGD:1588072
Bos taurus TAF4 VGNC VGNC:57029
Macaca mulatta TAF4 VGNC VGNC:98455
Canis familiaris TAF4 VGNC VGNC:54737
Felis catus TAF4 VGNC VGNC:81234