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  2. TAF1C - TATA-box binding protein associated factor, RNA polymerase I subunit C Gene

TAF1C - TATA-box binding protein associated factor, RNA polymerase I subunit C Gene

中文名称:TATA-box 结合蛋白相关因子,RNA 聚合酶 I 亚基 C

种属: Homo sapiens

同用名: SL1; TAFI95; TAFI110; MGC:39976

基因 ID: 9013 | 基因类型: protein coding

关于 TAF1C

Cytogenetic location: 16q24.1 Genomic coordinates (GRCh38): 16:84,177,855-84,187,057 (from NCBI)

This gene has 23 transcripts (splice variants) and 184 orthologues. Ubiquitous expression in spleen (RPKM 19.0), ovary (RPKM 12.6) and 25 other tissues.

功能概要

RNA 聚合酶 I 启动转录需要形成一个复合物,该复合物由 TATA 结合蛋白 (TBP) 和三个特异于 RNA 聚合酶 I 的 TBP 相关因子 (TAF) 组成。该复合物称为 SL1,与核心启动子结合核糖体 RNA 基因正确定位聚合酶并充当调节信号的通道。该基因编码最大的 SL1 特异性 TAF。已经鉴定出编码不同同种型的多个选择性剪接的转录物变体。[RefSeq 提供,2011 年 7 月]

Initiation of transcription by RNA polymerase I requires the formation of a complex composed of the TATA-binding protein (TBP) and three TBP-associated factors (TAFs) specific for RNA polymerase I. This complex, known as SL1, binds to the core promoter of ribosomal RNA genes to position the polymerase properly and acts as a channel for regulatory signals. This gene encodes the largest SL1-specific TAF. Multiple alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jul 2011]

TAF1C 基因产物(7)

mRNA Protein Name
NM_001243156.2 NP_001230085.2 TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 3
NM_001243157.2 NP_001230086.1 TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 4
NM_001243158.2 NP_001230087.1 TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 4
NM_001243159.2 NP_001230088.1 TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 5
NM_001243160.2 NP_001230089.1 TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 6
NM_005679.4 NP_005670.4 TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 1
NM_139353.3 NP_647610.3 TATA box-binding protein-associated factor RNA polymerase I subunit C isoform 2
基因本体论
  • 分子功能
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA polymerase I core promoter sequence-specific DNA binding IDA
IDA: 通过直接分析推断
22368283 GOA
enables RNA polymerase I general transcription initiation factor activity IDA
IDA: 通过直接分析推断
12498690 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
11250903 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of RNA polymerase transcription factor SL1 complex IDA
IDA: 通过直接分析推断
11250903 GOA
located in nucleolus IDA
IDA: 通过直接分析推断
12498690 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断
蛋白主名 其他名称

TATA box-binding protein-associated factor RNA polymerase I subunit C

RNA polymerase I-specific TBP-associated factor 110 kDa

TAF1C 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
TAF1C Q15572 TAF12 Homo sapiens Q16514
Pull Down
17268553
种属内
TAF1C Q15572 SET Homo sapiens Q01105
Affinity Techniques
17318177
种属内
TAF1C Q15572 SET Homo sapiens Q01105
Anti Tag CoIP
17318177
种属内
TAF1C Q15572 SET Homo sapiens Q01105
Pull Down
17318177
种属内
TAF1C Q15572 TAF1B Homo sapiens Q53T94
Anti Tag CoIP
33961781
种属内
TAF1C Q15572 TAF1B Homo sapiens Q53T94
Anti Tag CoIP
17318177
种属内
TAF1C Q15572 TBP Homo sapiens P20226
Pull Down
17318177
种属内
TAF1C Q15572 TBP Homo sapiens P20226
Anti Bait CoIP
17268553
种属间: 跨种属相互作用 种属内: 同种属相互作用

TAF1C 抗体

目录号 产品名 应用 反应物种
HY-P82394 TAF1C Antibody (YA2139) WB, IP Human

关联疾病

疾病名称 别名
Atrial Septal Defect 1

ASD1

Atrial Heart Septal Defect 1

Asd

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris TAF1C VGNC VGNC:47079
Macaca mulatta TAF1C VGNC VGNC:78089
Felis catus TAF1C VGNC VGNC:82313
Mus musculus TAF1C MGD MGI:109576
Bos taurus TAF1C VGNC VGNC:35571
Rattus norvegicus TAF1C RGD RGD:1305658