1. Gene
  2. NELFE - negative elongation factor complex member E Gene

NELFE - negative elongation factor complex member E Gene

中文名称:负伸长因子复数成员 E

种属: Homo sapiens

同用名: RD; RDP; RDBP; D6S45; NELF-E

基因 ID: 7936 | 基因类型: protein coding

关于 NELFE

Cytogenetic location: 6p21.33 Genomic coordinates (GRCh38): 6:31,952,087-31,958,971 (from NCBI)

This gene has 14 transcripts (splice variants), 1 gene allele and 193 orthologues. Ubiquitous expression in testis (RPKM 52.1), ovary (RPKM 20.1) and 25 other tissues.

功能概要

由该基因编码的蛋白质是称为负延伸因子 (NELF) 的复合物的一部分,它抑制 RNA 聚合酶 II 转录物延伸。该蛋白与核 RNA 结合蛋白具有相似性;但是,尚未证明这种蛋白质与 RNA 结合。该蛋白质含有大量交替的碱性和酸性残基,主要是精氨酸 (R) 和天冬氨酸 (D) 。该基因位于 6 号染色体上的主要组织相容性复合体 (MHC) III 类区域。[RefSeq 提供,2008 年 7 月]

The protein encoded by this gene is part of a complex termed negative elongation factor (NELF) which represses RNA polymerase II transcript elongation. This protein bears similarity to nuclear RNA-binding proteins; however, it has not been demonstrated that this protein binds RNA. The protein contains a tract of alternating basic and acidic residues, largely arginine (R) and aspartic acid (D). The gene localizes to the major histocompatibility complex (MHC) class III region on chromosome 6. [provided by RefSeq, Jul 2008]

NELFE 基因产物(1)

mRNA Protein Name
NM_002904.6 NP_002895.3 negative elongation factor E
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables RNA binding IDA
IDA: 通过直接分析推断
27256882 GOA
enables chromatin binding IDA
IDA: 通过直接分析推断
14701750 GOA
enables mRNA binding IDA
IDA: 通过直接分析推断
27256882 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
12612062 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in negative regulation of transcription elongation by RNA polymerase II IDA
IDA: 通过直接分析推断
12612062 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of NELF complex IDA
IDA: 通过直接分析推断
12612062 GOA
part of NELF complex IPI
IPI: 通过物理相互作用推断
12612062 GOA
located in chromatin IDA
IDA: 通过直接分析推断
14701750 GOA
is active in nucleus IDA
IDA: 通过直接分析推断
27256882 GOA
located in nucleus IDA
IDA: 通过直接分析推断
12612062 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

NELFE 蛋白结构

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (269 - 323)

  • 0
  • 100
  • 200
  • 300
  • 380 a.a.
蛋白主名 其他名称

negative elongation factor E

RD RNA-binding protein

NELFE 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra NELFE P18615 NELFB Homo sapiens Q8WX92-2
Y2H Prey Pooling
32296183
Intra NELFE P18615 NELFB Homo sapiens Q8WX92-2
Y2H Array
32296183
Intra NELFE P18615 NELFB Homo sapiens Q8WX92-2
Validated Y2H
32296183
Intra NELFE P18615 KANK2 Homo sapiens Q63ZY3
Validated Y2H
32296183
Intra NELFE P18615 KANK2 Homo sapiens Q63ZY3
Y2H Prey Pooling
32296183
Intra NELFE P18615 KANK2 Homo sapiens Q63ZY3
Y2H Array
32296183
Intra NELFE P18615 CCDC57 Homo sapiens Q2TAC2
Y2H Prey Pooling
25416956
Intra NELFE P18615 NELFB Homo sapiens Q8WX92
Anti Tag CoIP
12612062
Intra NELFE P18615 NELFB Homo sapiens Q8WX92
Y2H Array
20211142
Intra NELFE P18615 NELFB Homo sapiens Q8WX92
Anti Tag CoIP
26496610
Intra NELFE P18615 NELFB Homo sapiens Q8WX92
Anti Tag CoIP
33961781
Intra NELFE P18615 NELFB Homo sapiens Q8WX92
Y2H
14667819
Intra NELFE P18615 NELFB Homo sapiens Q8WX92
Anti Tag CoIP
28514442
Intra NELFE P18615 NELFB Homo sapiens Q8WX92
TAP
24981860
Intra NELFE P18615 MTUS2 Homo sapiens Q5JR59
Y2H Prey Pooling
25416956
Intra NELFE P18615 MTUS2 Homo sapiens Q5JR59
Validated Y2H
25416956
Intra NELFE P18615 MTUS2 Homo sapiens Q5JR59
Y2H Array
25416956
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Immunodeficiency 12

Combined Immunodeficiency Due To Malt1 Deficiency

IMD12

Immunodeficiency, Type 12

Hairy Tongue

Overgrowth Of Filiform Papillae

Tongue, Hairy

Benign Pleural Mesothelioma

Mesothelioma Of Pleura

Benign Neoplasm Of Mesothelial Tissue Of Pleura

Pleural Malignant Mesothelioma

Wolf-Hirschhorn Syndrome

Pitt-Rogers-Danks Syndrome

WHS

Chromosome 4p16.3 Deletion Syndrome

Wittwer Syndrome

4p- Syndrome

Pitt Syndrome

4p Deletion Syndrome

Distal Deletion 4p

Distal Monosomy 4p

Telomeric Deletion 4p

Prds

4p Syndrome

Chromosome 4p Syndrome

Microcephaly, Iugr, Hypertelorism, Ptosis, Iris Coloboma, Hooked Nose, External Ear Dysplasia, Psychomotor Retardation

Wolf Syndrome

Chromosome 4p Deletion Syndrome

Chromosome 4p Monosomy

Del Syndrome

Monosomy 4p

Partial Monosomy 4p

Chromosome 4 Short Arm Deletion

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus NELFE RGD RGD:1303325
Macaca mulatta NELFE VGNC VGNC:83437
Bos taurus NELFE VGNC VGNC:32002
Felis catus NELFE VGNC VGNC:63774
Mus musculus NELFE MGD MGI:102744