1. Gene
  2. VMP1 - vacuole membrane protein 1 Gene

VMP1 - vacuole membrane protein 1 Gene

中文名称:液泡膜蛋白 1

种属: Homo sapiens

同用名: EPG3; TANGO5; TMEM49

基因 ID: 81671 | 基因类型: protein coding

关于 VMP1

Cytogenetic location: 17q23.1 Genomic coordinates (GRCh38): 17:59,707,654-59,842,255 (from NCBI)

This gene has 17 transcripts (splice variants), 264 orthologues and 3 paralogues. Ubiquitous expression in gall bladder (RPKM 60.7), appendix (RPKM 49.2) and 25 other tissues.

功能概要

该基因编码一种跨膜蛋白,在自噬过程中起着关键的调节作用。即使在营养丰富的条件下,培养细胞中编码蛋白的异位过表达也会引发自噬。该基因在受胰腺炎影响的腺泡细胞中过度表达,其中编码的蛋白质在称为酶噬的过程中介导潜在有害的活化酶原颗粒的隔离和降解。[RefSeq 提供,2016 年 7 月]

This gene encodes a transmembrane protein that plays a key regulatory role in the process of Autophagy. The ectopic overexpression of the encoded protein in cultured cells triggers Autophagy even under nutrient-rich conditions. This gene is overexpressed in pancreatitis affected acinar cells where the encoded protein mediates sequestration and degradation of potentially deleterious activated zymogen granules in a process termed, zymophagy. [provided by RefSeq, Jul 2016]

VMP1 基因产物(10)

mRNA Protein Name
NM_001329394.2 NP_001316323.1 vacuole membrane protein 1 isoform 1
NM_001329395.2 NP_001316324.1 vacuole membrane protein 1 isoform 2
NM_001329396.2 NP_001316325.1 vacuole membrane protein 1 isoform 3
NM_001329397.2 NP_001316326.1 vacuole membrane protein 1 isoform 4
NM_001329398.2 NP_001316327.1 vacuole membrane protein 1 isoform 5
NM_001329399.2 NP_001316328.1 vacuole membrane protein 1 isoform 6
NM_001329400.2 NP_001316329.1 vacuole membrane protein 1 isoform 7
NM_001329401.2 NP_001316330.1 vacuole membrane protein 1 isoform 8
NM_001329402.2 NP_001316331.1 vacuole membrane protein 1 isoform 9
NM_030938.5 NP_112200.2 vacuole membrane protein 1 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables phospholipid scramblase activity IDA
IDA: 通过直接分析推断
33850023 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
17724469 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in autophagosome assembly IDA
IDA: 通过直接分析推断
28890335 GOA
involved in autophagosome assembly IMP
IMP: 通过突变表型推断
30093494 GOA
involved in autophagosome membrane docking IDA
IDA: 通过直接分析推断
28890335 GOA
involved in autophagy IDA
IDA: 通过直接分析推断
28890335 GOA
involved in cell junction assembly IMP
IMP: 通过突变表型推断
17724469 GOA
involved in cell-cell adhesion IMP
IMP: 通过突变表型推断
17724469 GOA
involved in lipoprotein transport IMP
IMP: 通过突变表型推断
31526472 GOA
involved in mitochondrion-endoplasmic reticulum membrane tethering IDA
IDA: 通过直接分析推断
28890335 GOA
involved in organelle localization by membrane tethering IDA
IDA: 通过直接分析推断
28890335 GOA
involved in positive regulation of ATPase-coupled calcium transmembrane transporter activity IDA
IDA: 通过直接分析推断
28890335 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in endoplasmic reticulum IDA
IDA: 通过直接分析推断
17724469 GOA
located in endoplasmic reticulum membrane IDA
IDA: 通过直接分析推断
28890335 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断
蛋白主名 其他名称

vacuole membrane protein 1

ectopic P-granules autophagy protein 3 homolog

VMP1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
VMP1 Q96GC9 CYB5R3 Homo sapiens P00387
Y2H Prey Pooling
32296183
种属内
VMP1 Q96GC9 CYB5R3 Homo sapiens P00387
Y2H Array
32296183
种属内
VMP1 Q96GC9 MEOX2 Homo sapiens Q6FHY5
Y2H Array
32296183
种属内
VMP1 Q96GC9 MEOX2 Homo sapiens Q6FHY5
Y2H Prey Pooling
32296183
种属内
VMP1 Q96GC9 FAM209A Homo sapiens Q5JX71
Y2H Prey Pooling
32296183
种属内
VMP1 Q96GC9 FAM209A Homo sapiens Q5JX71
Y2H Array
32296183
种属内
VMP1 Q96GC9 SLC39A9 Homo sapiens Q9NUM3
Validated Y2H
32296183
种属内
VMP1 Q96GC9 SLC39A9 Homo sapiens Q9NUM3
Y2H Prey Pooling
32296183
种属内
VMP1 Q96GC9 SLC39A9 Homo sapiens Q9NUM3
Y2H Array
32296183
种属内
VMP1 Q96GC9 ERGIC3 Homo sapiens Q9Y282
Validated Y2H
32296183
种属内
VMP1 Q96GC9 ERGIC3 Homo sapiens Q9Y282
Y2H Array
32296183
种属内
VMP1 Q96GC9 ERGIC3 Homo sapiens Q9Y282
Y2H Prey Pooling
32296183
种属内
VMP1 Q96GC9 BECN1 Homo sapiens Q14457
Anti Bait CoIP
23316280
种属内
VMP1 Q96GC9 BECN1 Homo sapiens Q14457
Anti Tag CoIP
23316280
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Pancreatitis

Mumps Pancreatitis

Acute Pancreatitis

Pancreatitis

Pancreatitis, Acute Necrotizing

Pancreatitis Nos

Acute Pancreas Inflammation

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Rattus norvegicus VMP1 RGD RGD:70367
Canis familiaris VMP1 VGNC VGNC:49873
Macaca mulatta VMP1 VGNC VGNC:104673
Mus musculus VMP1 MGD MGI:1923159
Bos taurus VMP1 VGNC VGNC:36806
Felis catus VMP1 VGNC VGNC:66951