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  2. RIOK3 - RIO kinase 3 Gene

RIOK3 - RIO kinase 3 Gene

中文名称:RIO 激酶 3

种属: Homo sapiens

同用名: SUDD

基因 ID: 8780 | 基因类型: protein coding

关于 RIOK3

Cytogenetic location: 18q11.2 Genomic coordinates (GRCh38): 18:23,453,287-23,483,140 (from NCBI)

This gene has 11 transcripts (splice variants), 211 orthologues and 3 paralogues. Ubiquitous expression in bone marrow (RPKM 81.4), esophagus (RPKM 38.1) and 24 other tissues.

功能概要

该基因首先通过其产物与构巢曲霉 SUDD 蛋白的相似性得到鉴定。该基因现在被认为是右开放阅读框 (RIO) 激酶基因家族的成员。该基因编码定位于细胞质的丝氨酸/苏氨酸激酶,并在前 40 S 核糖体亚基的加工中发挥作用。可变剪接导致多个转录本变体。[RefSeq 提供,2017 年 1 月]

This gene was first identified by the similarity of its product to the Aspergillus nidulans SUDD protein. This gene is now recognized as a member of the right open reading frame (RIO) kinase gene family. This gene encodes a serine/threonine kinase that localizes to the cytoplasm and plays a role in the processing of the pre-40 S ribosomal subunit. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2017]

RIOK3 基因产物(2)

mRNA Protein Name
NM_001348193.2 NP_001335122.1 serine/threonine-protein kinase RIO3 isoform 2
NM_003831.5 NP_003822.2 serine/threonine-protein kinase RIO3 isoform 1
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables caspase binding IDA
IDA: 通过直接分析推断
19557502 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
19557502 GOA
enables protein serine/threonine kinase activity IDA
IDA: 通过直接分析推断
25865883 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in cellular response to dsDNA IMP
IMP: 通过突变表型推断
24807708 GOA
involved in cellular response to dsRNA IMP
IMP: 通过突变表型推断
24807708 GOA
involved in cellular response to virus IMP
IMP: 通过突变表型推断
24807708 GOA
involved in maturation of SSU-rRNA IMP
IMP: 通过突变表型推断
22418843 GOA
involved in negative regulation of MDA-5 signaling pathway IMP
IMP: 通过突变表型推断
25865883 GOA
involved in negative regulation of canonical NF-kappaB signal transduction IDA
IDA: 通过直接分析推断
19557502 GOA
involved in negative regulation of protein-containing complex assembly IDA
IDA: 通过直接分析推断
25865883 GOA
involved in positive regulation of innate immune response IMP
IMP: 通过突变表型推断
24807708 GOA
involved in positive regulation of interferon-beta production IMP
IMP: 通过突变表型推断
24807708 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of preribosome, small subunit precursor IDA
IDA: 通过直接分析推断
22072790 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

RIOK3 蛋白结构

RIO1

RIO1: RIO1 family (265 - 462)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 519 a.a.
蛋白主名 其他名称

serine/threonine-protein kinase RIO3

homolog of the Aspergillus nidulans sudD gene product

RIOK3 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
RIOK3 O14730 CASP10 Homo sapiens Q92851-7 19557502
种属内
RIOK3 O14730 IRF3 Homo sapiens Q14653 24807708
种属内
RIOK3 O14730 IRF3 Homo sapiens Q14653 24807708
种属内
RIOK3 O14730 TBK1 Homo sapiens Q9UHD2 24807708
种属内
RIOK3 O14730 CASP10 Homo sapiens Q92851
Y2H
19557502
种属内
RIOK3 O14730 CASP10 Homo sapiens Q92851 21988832
种属内
RIOK3 O14730 IFIH1 Homo sapiens Q9BYX4
Y2H
25865883
种属内
RIOK3 O14730 IFIH1 Homo sapiens Q9BYX4 25865883
种属内
RIOK3 O14730 IFIH1 Homo sapiens Q9BYX4 25865883
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Cecum Carcinoma

Cecum Cancer

Caecum Carcinoma

Carcinoma Of Cecum

Cecal Cancer

Malignant Neoplasm Of Caecum

Malignant Tumor Of The Cecum

Filippi Syndrome

Scott Craniodigital Syndrome With Mental Retardation

Type 1 Syndactyly-Microcephaly-Intellectual Disability Syndrome

FLPIS

Scott Bryant Graham Syndrome

Craniodigital-Intellectual Disability Syndrome

Scott Craniodigital Syndrome

Scott-Bryant-Graham Syndrome

Syndactyly, Type I, With Microcephaly And Mental Retardation

Syndactyly Type I With Microcephaly And Intellectual Disability

Unusual Facial Appearance, Microcephaly, Growth And Intellectual Disability And Syndactyly

Craniodigital Syndrome With Intellectual Disability

Craniodigital Syndrome-Intellectual Disability Syndrome

Craniodigital Syndrome-Intellectual Disability, Scott Type

Intellectual Disability-Craniodigital Syndrome

Cecum Adenocarcinoma

Cecal Adenocarcinoma

Adenocarcinoma Of Cecum

Diverticulitis Of Colon

Colonic Diverticular Disease

Diverticulitis, Colonic

Diverticular Disease Of Colon

Diverticulitis
疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Canis familiaris RIOK3 VGNC VGNC:53629
Mus musculus RIOK3 MGD MGI:1914128
Bos taurus RIOK3 VGNC VGNC:49977
Rattus norvegicus RIOK3 RGD RGD:1310833
Felis catus RIOK3 VGNC VGNC:64638
Macaca mulatta RIOK3 VGNC VGNC:104241
Others RIOK3 NCBI