1. Gene
  2. FUBP1 - far upstream element binding protein 1 Gene

FUBP1 - far upstream element binding protein 1 Gene

中文名称:远上游元件结合蛋白 1

种属: Homo sapiens

同用名: FBP; FUBP; hDH V

基因 ID: 8880 | 基因类型: protein coding

关于 FUBP1

Cytogenetic location: 1p31.1 Genomic coordinates (GRCh38): 1:77,944,055-77,979,501 (from NCBI)

This gene has 15 transcripts (splice variants), 181 orthologues, 12 paralogues and is associated with 80 phenotypes. Ubiquitous expression in lymph node (RPKM 23.3), bone marrow (RPKM 20.3) and 25 other tissues.

功能概要

该基因编码的蛋白质是一种单链 DNA 结合蛋白,可与多个 DNA 元件结合,包括位于 c-Myc 上游的远上游元件 (FUSE) 。与 FUSE 的结合发生在非编码链上,对未分化细胞中 c-Myc 的调节很重要。该蛋白质包含三个结构域,一个两亲性螺旋 N 末端结构域、一个 DNA 结合中心结构域和一个包含三个富含酪氨酸的基序的 C 末端反式激活结构域。 N 端结构域被认为抑制 C 端结构域的活性。这种蛋白质也被认为可以结合 RNA,并且含有 3'-5' 解旋酶活性,对 DNA-DNA 和 RNA-RNA 双链体具有体外活性。已在恶性组织中发现该基因的异常表达,该基因对神经系统和肺发育具有重要意义。这种蛋白质与病毒 RNA 的结合被认为在几种病毒性疾病中起作用,包括丙型肝炎和手足口病。可变剪接导致多个转录本变体。[RefSeq 提供,2014 年 12 月]

The protein encoded by this gene is a single stranded DNA-binding protein that binds to multiple DNA elements, including the far upstream element (FUSE) located upstream of c-Myc. Binding to FUSE occurs on the non-coding strand, and is important to the regulation of c-Myc in undifferentiated cells. This protein contains three domains, an amphipathic helix N-terminal domain, a DNA-binding central domain, and a C-terminal transactivation domain that contains three tyrosine-rich motifs. The N-terminal domain is thought to repress the activity of the C-terminal domain. This protein is also thought to bind RNA, and contains 3'-5' helicase activity with in vitro activity on both DNA-DNA and RNA-RNA duplexes. Aberrant expression of this gene has been found in malignant tissues, and this gene is important to neural system and lung development. Binding of this protein to viral RNA is thought to play a role in several viral diseases, including hepatitis C and hand, foot and mouth disease. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2014]

FUBP1 基因产物(6)

mRNA Protein Name
NM_001303433.2 NP_001290362.1 far upstream element-binding protein 1 isoform 1
NM_001376055.1 NP_001362984.1 far upstream element-binding protein 1 isoform 3
NM_001376056.1 NP_001362985.1 far upstream element-binding protein 1 isoform 4
NM_001376057.1 NP_001362986.1 far upstream element-binding protein 1 isoform 5
NM_001410804.1 NP_001397733.1 far upstream element-binding protein 1 isoform 6
NM_003902.5 NP_003893.2 far upstream element-binding protein 1 isoform 2
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
20711187 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in positive regulation of gene expression IDA
IDA: 通过直接分析推断
19087307 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in nucleus IDA
IDA: 通过直接分析推断
19087307 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

FUBP1 蛋白结构

KH_1

KH_1: KH domain (102 - 164)

KH_1

KH_1: KH domain (188 - 251)

KH_1

KH_1: KH domain (280 - 339)

KH_1

KH_1: KH domain (380 - 443)

DUF1897

DUF1897: Domain of unknown function (DUF1897) (573 - 595)

DUF1897

DUF1897: Domain of unknown function (DUF1897) (601 - 632)

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  • 644 a.a.
蛋白主名 其他名称

far upstream element-binding protein 1

DNA helicase V

FUBP1 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
FUBP1 Q96AE4 USP22 Homo sapiens Q9UPT9
Anti Tag CoIP
21779003
种属内
FUBP1 Q96AE4 USP22 Homo sapiens Q9UPT9
Anti Bait CoIP
21779003
种属内
FUBP1 Q96AE4 AIMP2 Homo sapiens Q13155
Anti Bait CoIP
21285945
种属内
FUBP1 Q96AE4 AIMP2 Homo sapiens Q13155
Anti Tag CoIP
21285945
种属间: 跨种属相互作用 种属内: 同种属相互作用

FUBP1 抗体

目录号 产品名 应用 反应物种
HY-P81374 FUBP1 Antibody (YA1119) IHC-P Human

关联疾病

疾病名称 别名
Hand, Foot And Mouth Disease

Vesicular Stomatitis And Exanthem

Childhood Oligodendroglioma

Pediatric Oligodendroglioma

Oligodendroglioma, Childhood

Oligodendroglioma

Oligodendroglial Neoplasm

Oligodendroglial Tumor

Oligodendroglial Tumors

Well Differentiated Oligodendroglioma

Temporal Lobe Neoplasm

Neoplasm Of Temporal Lobe

Malignant Neoplasm Of Temporal Lobe

Tumor Of Temporal Lobe

Adult Oligodendroglioma

Adult Brain Oligodendroglioma

Grade Ii Adult Oligodendroglial Tumor

Oligodendroglioma, Adult

Mixed Glioma

Mixed Gliomas

Mixed Neuroglial Tumor

Glioma

Mouth Disease

Mouth Diseases

Mouth Disorders

Chordoid Glioma

Chordoid Glioma Of The Third Ventricle

Brain Glioma

Lower Grade Glioma

Intracranial Glioma

Glioma Nos

Diffuse Astrocytoma

Diffuse Astrocytoma, Low Grade

Who Grade Ii Astrocytoma

Fibrillary Astrocytoma

Gemistocytic Astrocytoma

Low-Grade Diffuse Astrocytoma

Protoplasmic Astrocytoma

Anaplastic Oligodendroglioma
Low Grade Glioma

Benign Glioma

Central Nervous System Benign Neoplasm

Benign Neoplasm Of The Central Nervous System

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus FUBP1 VGNC VGNC:55193
Felis catus FUBP1 VGNC VGNC:80212
Macaca mulatta FUBP1 VGNC VGNC:99956
Mus musculus FUBP1 MGD MGI:1196294
Rattus norvegicus FUBP1 RGD RGD:1591892
Others FUBP1 NCBI