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  2. MBD4 - methyl-CpG binding domain 4, DNA glycosylase Gene

MBD4 - methyl-CpG binding domain 4, DNA glycosylase Gene

中文名称:甲基-CpG 结合域 4,DNA 糖基化酶

种属: Homo sapiens

同用名: MED1; TPDS2

基因 ID: 8930 | 基因类型: protein coding

关于 MBD4

Cytogenetic location: 3q21.3 Genomic coordinates (GRCh38): 3:129,430,947-129,439,948 (from NCBI)

This gene has 10 transcripts (splice variants), 195 orthologues and 1 paralogue. Ubiquitous expression in lymph node (RPKM 27.7), spleen (RPKM 17.6) and 25 other tissues.

功能概要

由该基因编码的蛋白质是与甲基-CpG 结合结构域 (MBD) 相关的核蛋白家族的成员。这些蛋白质能够与甲基化 DNA 特异性结合,一些成员还可以抑制甲基化基因启动子的转录。该蛋白质在 N 末端包含一个 MBD 结构域,它在结合甲基化 DNA 和蛋白质相互作用方面发挥作用,并在 C 末端包含一个参与 DNA 修复的错配特异性糖基化酶结构域。已经观察到该基因编码多种亚型的可变剪接转录物变体。[RefSeq 提供,2013 年 1 月]

The protein encoded by this gene is a member of a family of nuclear proteins related by the presence of a methyl-CpG binding domain (MBD). These proteins are capable of binding specifically to methylated DNA, and some members can also repress transcription from methylated gene promoters. This protein contains an MBD domain at the N-terminus that functions both in binding to methylated DNA and in protein interactions and a C-terminal mismatch-specific glycosylase domain that is involved in DNA repair. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2013]

MBD4 基因产物(5)

mRNA Protein Name
NM_001276270.2 NP_001263199.1 methyl-CpG-binding domain protein 4 isoform 2
NM_001276271.2 NP_001263200.1 methyl-CpG-binding domain protein 4 isoform 3
NM_001276272.2 NP_001263201.1 methyl-CpG-binding domain protein 4 isoform 4
NM_001276273.2 NP_001263202.1 methyl-CpG-binding domain protein 4 isoform 5
NM_003925.3 NP_003916.1 methyl-CpG-binding domain protein 4 isoform 1
基因本体论
  • 分子功能
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
12702765 GOA
enables pyrimidine-specific mismatch base pair DNA N-glycosylase activity IDA
IDA: 通过直接分析推断
14614141 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

MBD4 蛋白结构

MBD

MBD: Methyl-CpG binding domain (80 - 149)

HhH-GPD

HhH-GPD: HhH-GPD superfamily base excision DNA repair protein (461 - 535)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 580 a.a.
蛋白主名 其他名称

methyl-CpG-binding domain protein 4

3,N(4)-ethenocytosine glycosylase

MBD4 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
种属内
MBD4 O95243 FADD Homo sapiens Q13158 12702765
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Tumor Predisposition Syndrome 2

TPDS2

Mbd4-Associated Neoplasia Syndrome

Mans

Man

Melanoma, Uveal 1

Melanoma, Uveal, Susceptibility To, 1

UVM1

Uveal Melanoma, Susceptibility To, 1

Uveal Melanoma 1

Rett Syndrome

Atypical Rett Syndrome

RTT

Rett Disorder

Rts

Autism, Dementia, Ataxia, And Loss Of Purposeful Hand Use

Rett Syndrome, Preserved Speech Variant

Rett Syndrome, Atypical

Rett'S Disorder

Rett Syndrome Variant

Autism-Dementia-Ataxia-Loss Of Purposeful Hand Use Syndrome

Cerebroatrophic Hyperammonemia

Rett Like Syndrome

Rett'S Syndrome

Atypical Rtt

Autism-Dementia-Ataxia-Loss Of Purposeful Hand Use

Rett Syndrome Preserved Speech Variant

Rett Syndrome Zappella Variant

Rett Syndrome, Zappella Variant

Angelman Syndrome

AS

Happy Puppet Syndrome

Happy Puppet Syndrome, Formerly

Puppetlike Syndrome

Inherited Cancer-Predisposing Syndrome

Hereditary Cancer-Predisposing Syndrome

Bap1 Tumor Predisposition Syndrome

Bap1-Related Tumor Predisposition Syndrome

Common Syndrome

Bap1 Cancer Syndrome

Bap1-Tpds

Cutaneous/Ocular Melanoma, Atypical Melanocytic Proliferations, And Other Internal Neoplasms

Tumor Predisposition Syndrome

Tumor Susceptibility Linked To Germline Bap1 Mutations

Cutaneous/Ocular Melanoma, Atypical Melanocytic Proliferations, Other Internal Neoplasms

Tumor Predisposition

Colorectal Cancer

Colon Cancer

Colorectal Carcinoma

Colon Carcinoma

Colorectal Cancer, Susceptibility To

Carcinoma Of Colon

CRC

Colorectal Cancer With Chromosomal Instability, Somatic

Colon Cancer, Somatic

Colon Cancer, Susceptibility To

Colonic Neoplasms

Colorectal Neoplasms

Colorectal Cancer, Somatic

Colon Cancer, Advanced, Somatic

Colonic Carcinoma

Colorectal Carcinomas

Colon Cancers

Colorectal Cancers

Cancer, Colorectal, Somatic

Cancer, Colon

Cancer, Colorectal, Susceptibility To

Colorectal Neoplasm

Colonic Neoplasm

Malignant Tumor Of Colon

Myopathy, Distal, 4

Distal Myopathy With Posterior Leg And Anterior Hand Involvement

MPD4

Williams Distal Myopathy

Distal Muscular Dystrophy 4

Distal Abd-Filaminopathy

Distal Myopathy 4

Myopathy, Distal, Type 4

Immunodeficiency-Centromeric Instability-Facial Anomalies Syndrome

Icf Syndrome

Immunodeficiency Syndrome, Variable

Ciid

Centromeric Instability, Immunodeficiency Syndrome

Immune Deficiency, Variable, With Centromeric Instability Of Chromosomes 1, 9, And 16

Icf

Lynch Syndrome

Hereditary Nonpolyposis Colon Cancer

Hereditary Nonpolyposis Colorectal Cancer

Hereditary Nonpolyposis Colorectal Carcinoma

Hereditary Nonpolyposis Colorectal Neoplasms

Familial Nonpolyposis Colon Cancer

Hnpcc

Coca 1

Hereditary Defective Mismatch Repair Syndrome

Hereditary Non-Polyposis Colon Cancer

Hereditary Non-Polyposis Colon Cancer Syndrome

Hereditary Non-Polyposis Colorectal Cancer

Hereditary Non-Polyposis Colorectal Cancer Syndrome

Hereditary Nonpolyposis Colon Cancer Syndrome

Hereditary Nonpolyposis Colorectal Cancer Syndrome

Hereditary Nonpolyposis Colorectal Neoplasm

Hnpcc - Hereditary Nonpolyposis Colon Cancer

Cancer Family Syndrome

Familial Nonpolyposis Colorectal Cancer

Colon Cancer, Familial Nonpolyposis

Colorectal Neoplasms, Hereditary Nonpolyposis

Cancer, Colorectal, Nonpolyposis, Hereditary

Colorectal Cancer, Hereditary Nonpolyposis, Type 1

Melanoma, Uveal

Uveal Melanoma

Choroidal Melanoma

Melanoma Of Uvea

Iris Melanoma

Malignant Melanoma Of Choroid

Malignant Melanoma Of Iris

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Bos taurus MBD4 VGNC VGNC:31276
Mus musculus MBD4 MGD MGI:1333850
Macaca mulatta MBD4 VGNC VGNC:74671
Canis familiaris MBD4 VGNC VGNC:43052
Rattus norvegicus MBD4 RGD RGD:1585874
Felis catus MBD4 VGNC VGNC:68200