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  2. MBD2 - methyl-CpG binding domain protein 2 Gene

MBD2 - methyl-CpG binding domain protein 2 Gene

中文名称:甲基-CpG 结合域蛋白 2

种属: Homo sapiens

同用名: DMTase; NY-CO-41

基因 ID: 8932 | 基因类型: protein coding

关于 MBD2

Cytogenetic location: 18q21.2 Genomic coordinates (GRCh38): 18:54,151,606-54,224,669 (from NCBI)

This gene has 5 transcripts (splice variants), 122 orthologues and 8 paralogues. Ubiquitous expression in thyroid (RPKM 19.7), lymph node (RPKM 18.4) and 25 other tissues.

功能概要

DNA 甲基化是真核生物基因组的主要修饰,在哺乳动物发育中起着至关重要的作用。人类蛋白质 MECP2、MBD1、MBD2、MBD3 和 MBD4 包含一个核蛋白家族,这些核蛋白与每个甲基-CpG 结合域 (MBD) 中的存在相关。除 MBD3 外,这些蛋白质中的每一种都能够特异性结合甲基化 DNA。 MECP2、MBD1 和 MBD2 也可以抑制甲基化基因启动子的转录。由该基因编码的蛋白质可能作为甲基化信号生物学后果的介体发挥作用。另据报道,由于 DNA 甲基化会导致基因沉默,因此该蛋白可作为去甲基化酶激活转录。已发现该基因的两个转录本变体编码不同的亚型。[RefSeq 提供,2011 年 2 月]

DNA methylation is the major modification of eukaryotic genomes and plays an essential role in mammalian development. Human proteins MECP2, MBD1, MBD2, MBD3, and MBD4 comprise a family of nuclear proteins related by the presence in each of a methyl-CpG binding domain (MBD). Each of these proteins, with the exception of MBD3, is capable of binding specifically to methylated DNA. MECP2, MBD1 and MBD2 can also repress transcription from methylated gene promoters. The protein encoded by this gene may function as a mediator of the biological consequences of the methylation signal. It is also reported that the this protein functions as a demethylase to activate transcription, as DNA methylation causes gene silencing. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2011]

MBD2 基因产物(2)

mRNA Protein Name
NM_003927.5 NP_003918.1 methyl-CpG-binding domain protein 2 isoform 1
NM_015832.6 NP_056647.1 methyl-CpG-binding domain protein 2 testis-specific isoform
基因本体论
  • 分子功能
  • 生物过程
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables C2H2 zinc finger domain binding IPI
IPI: 通过物理相互作用推断
11553631 GOA
enables methyl-CpG binding IDA
IDA: 通过直接分析推断
21029866 GOA
enables molecular adaptor activity EXP
EXP: 通过实验结果推断
25753662 GOA
enables protein binding IPI
IPI: 通过物理相互作用推断
12183469 GOA
enables protein domain specific binding IPI
IPI: 通过物理相互作用推断
11984006 GOA
生物过程 GO 注释 逻辑证据 参考文献 来源
involved in DNA methylation-dependent heterochromatin formation IGI
IGI: 通过遗传相互作用推断
23770133 GOA
involved in chromatin remodeling IDA
IDA: 通过直接分析推断
9790534 GOA
involved in negative regulation of transcription by RNA polymerase II IGI
IGI: 通过遗传相互作用推断
23770133 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
part of NuRD complex IDA
IDA: 通过直接分析推断
33283408 GOA
located in chromatin IDA
IDA: 通过直接分析推断
20523938 GOA
located in nucleus IDA
IDA: 通过直接分析推断
11553631 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

MBD2 蛋白结构

MBD

MBD: Methyl-CpG binding domain (147 - 215)

MBD_C

MBD_C: C-terminal domain of methyl-CpG binding protein 2 and 3 (295 - 387)

  • 0
  • 100
  • 200
  • 300
  • 411 a.a.
蛋白主名 其他名称

methyl-CpG-binding domain protein 2

demethylase

MBD2 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra MBD2 Q9UBB5 PURB Homo sapiens Q96QR8
Y2H Prey Pooling
32296183
Intra MBD2 Q9UBB5 PURB Homo sapiens Q96QR8
Y2H Array
32296183
Intra MBD2 Q9UBB5 GATAD2A Homo sapiens Q86YP4
FPS
25753662
Intra MBD2 Q9UBB5 GATAD2A Homo sapiens Q86YP4
Pull Down
16415179
Intra MBD2 Q9UBB5 GATAD2A Homo sapiens Q86YP4
NMR
25753662
种属间: 跨种属相互作用 种属内: 同种属相互作用

关联疾病

疾病名称 别名
Cerebellar Ataxia, Deafness, And Narcolepsy, Autosomal Dominant

Autosomal Dominant Cerebellar Ataxia, Deafness And Narcolepsy

ADCADN

Autosomal Dominant Cerebellar Ataxia, Deafness, And Narcolepsy

Adca-Dn Syndrome

Autosomal Dominant Cerebellar Ataxia-Deafness-Narcolepsy Syndrome

Adca-Dn

Autosomal Dominant Cerebellar Ataxia-Hearing Loss-Narcolepsy Syndrome

Ataxia, Cerebellar, Deafness, And Narcolepsy, Autosomal Dominant

Rett Syndrome

Atypical Rett Syndrome

RTT

Rett Disorder

Rts

Autism, Dementia, Ataxia, And Loss Of Purposeful Hand Use

Rett Syndrome, Preserved Speech Variant

Rett Syndrome, Atypical

Rett'S Disorder

Rett Syndrome Variant

Autism-Dementia-Ataxia-Loss Of Purposeful Hand Use Syndrome

Cerebroatrophic Hyperammonemia

Rett Like Syndrome

Rett'S Syndrome

Atypical Rtt

Autism-Dementia-Ataxia-Loss Of Purposeful Hand Use

Rett Syndrome Preserved Speech Variant

Rett Syndrome Zappella Variant

Rett Syndrome, Zappella Variant

Hutchinson-Gilford Progeria Syndrome

Progeria

HGPS

Hutchinson-Gilford Syndrome

Hutchinson-Gilford Progeria

Hutchinson Gilford Syndrome

Hutchinson Gilford Progeria Syndrome

Hutchinson-Gilford Disease

Progeria Of Childhood

Hutchinson-Gilford-Progeria Syndrome

Klatskin'S Tumor

Klatskin Tumor

Hilar Cholangiocarcinoma

Perihilar Cholangiocarcinoma

Hilar Cholangiocellular Carcinoma

Klatskin Tumour

Klatskin'S Tumour

Perihilar Extrahepatic Bile Duct Carcinoma

Hilar Cca

Adenocarcinoma Of Hepatic Duct

Klatskin Tumour Of Biliary Tree

Tetralogy Of Fallot

TOF

Fallot Tetralogy

Ventricular Septal Defect With Pulmonary Stenosis Or Atresia, Dextraposition Of Aorta, And Hypertrophy Of Right Ventricle

Tetrad Of Fallot

Fallot Tetrad

Fallot Disease

Fallot Complex

Subpulmonic Stenosis, Ventricular Septal Defect, Overriding Aorta, And Right Ventricular Hypertrophy

Interventricular Septal Defect With Dextroposition Of Aorta, Pulmonary Stenosis And Hypertrophy Of Right Ventricle

Interventricular Septal Defect, In Tetralogy Of Fallot

Ventricular Septal Defect With Obstructed Right Ventricular Outflow

Tof - [Tetralogy Of Fallot]

Pulmonary Atresia With Ventricular Septal Defect [Fallot Type]

Pulmonary Atresia, Ventricular Septal Defect And Mapcas

Pulmonary Atresia With Ventricular Septal Defect And Systemic-To-Pulmonary Collateral Arteries [Fallot Type]

Breast Cancer

Breast Carcinoma

Male Breast Cancer

Breast Cancer, Familial

Malignant Neoplasm Of Breast

Breast Cancer, Susceptibility To

Breast Cancer, Early-Onset

Malignant Tumor Of Breast

Carcinoma Of Male Breast

Breast Cancer, Invasive Ductal

Breast Cancer, Protection Against

Breast Cancer, Somatic

Breast Cancer, Male

Breast Cancer, Lobular, Somatic

Breast Tumor

Mammary Cancer

Mammary Tumor

Malignant Neoplasm Of Male Breast

Mammary Carcinoma

Male Breast Carcinoma

Familial Cancer Of Breast

Invasive Ductal Breast Carcinoma

Breast Cancer Susceptibility

Breast Cancer, Male, Susceptibility To

Breast Cancer, Early-Onset, Susceptibility To

Malignant Tumor Of The Breast

Mammary Neoplasm

Primary Breast Cancer

Neoplasm Of Male Breast

Carcinoma Of Breast

Breast Cancer In Men

Familial Breast Cancer

Cancer Of Breast

BC

Breast Cancer Familial

Breast Cancer Familial Male

Breast Cancer, Familial Male

Breast Male Carcinoma

Breast Neoplasms

Breast Neoplasms, Male

Mammary Tumors

Mammary Carcinomas

Cancer, Breast

Cancer, Breast, Susceptibility

Invasive Breast Ductal Carcinoma

Breast Neoplasm

Susceptibility To Breast Cancer

Mammary Neoplasms

Animal Mammary Neoplasms

Primary Malignant Neoplasm Of Breast

Infiltrating Ductal Carcinoma Of Breast

Infiltrating Duct Carcinoma Of Unspecified Site

Infiltrating Ductular Carcinoma Of Unspecified Site

Invasive Breast Carcinoma Of No Special Type

Microinvasive Carcinoma Of Breast

Carcinoma With Apocrine Differentiation

疾病名称 别名
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

直系同源

种属 基因名 来源 基因 ID
Mus musculus MBD2 MGD MGI:1333813
Canis familiaris MBD2 VGNC VGNC:59230
Macaca mulatta MBD2 VGNC VGNC:74670
Rattus norvegicus MBD2 RGD RGD:1595452
Bos taurus MBD2 VGNC VGNC:56368
Felis catus MBD2 VGNC VGNC:80452