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  2. NUP50 - nucleoporin 50 Gene

NUP50 - nucleoporin 50 Gene

中文名称:核孔蛋白 50

种属: Homo sapiens

同用名: NPAP60; NPAP60L

基因 ID: 10762 | 基因类型: protein coding

关于 NUP50

Cytogenetic location: 22q13.31 Genomic coordinates (GRCh38): 22:45,163,925-45,188,017 (from NCBI)

This gene has 19 transcripts (splice variants) and 219 orthologues. Ubiquitous expression in bone marrow (RPKM 16.3), lymph node (RPKM 14.7) and 25 other tissues.

功能概要

核孔复合体是一个巨大的结构,延伸穿过核膜,形成调节细胞核和细胞质之间大分子流动的通道。核孔蛋白是真核细胞核孔复合体的主要成分。由该基因编码的蛋白质是含有核孔蛋白的 FG 重复的成员,在 importin-alpha:beta 介导的核蛋白导入中起可溶性辅助因子的作用。在 5、6 和 14 号染色体上发现了该基因的假基因。已发现该基因编码不同亚型的两个转录变体。[RefSeq 提供,2008 年 7 月]

The nuclear pore complex is a massive structure that extends across the nuclear envelope, forming a gateway that regulates the flow of macromolecules between the nucleus and the cytoplasm. Nucleoporins are the main components of the nuclear pore complex in eukaryotic cells. The protein encoded by this gene is a member of the FG-repeat containing nucleoporins that functions as a soluble cofactor in importin-alpha:beta-mediated nuclear protein import. Pseudogenes of this gene are found on chromosomes 5, 6, and 14. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]

NUP50 基因产物(2)

mRNA Protein Name
NM_007172.4 NP_009103.2 nuclear pore complex protein Nup50 isoform b
NM_153645.2 NP_705931.1 nuclear pore complex protein Nup50 isoform a
基因本体论
  • 分子功能
  • 细胞组分
分子功能 GO 注释 逻辑证据 参考文献 来源
enables protein binding IPI
IPI: 通过物理相互作用推断
12802065 GOA
细胞组分 GO 注释 逻辑证据 参考文献 来源
located in nuclear envelope IDA
IDA: 通过直接分析推断
24315095 GOA
located in nuclear membrane IDA
IDA: 通过直接分析推断
12802065 GOA
EXP:通过实验结果推断 IDA:通过直接分析推断 IPI:通过物理相互作用推断 IMP:通过突变表型推断 IGI:通过遗传相互作用推断 IEP:通过表达模式推断

NUP50 蛋白结构

NUP50

NUP50: NUP50 (Nucleoporin 50 kDa) (2 - 68)

Ran_BP1

Ran_BP1: RanBP1 domain (352 - 465)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 468 a.a.
蛋白主名 其他名称

nuclear pore complex protein Nup50

50 kDa nucleoporin

NUP50 蛋白互作信息

分类
蛋白名称 蛋白编号 互作蛋白 互作蛋白种属 互作蛋白编号 实验方法 参考文献
Intra NUP50 Q9UKX7 KPNA2 Homo sapiens Q7Z726
Y2H Array
25416956
Intra NUP50 Q9UKX7 KPNA2 Homo sapiens P52292
Y2H Array
25416956
Intra NUP50 Q9UKX7 KPNA2 Homo sapiens P52292
Y2H Array
32296183
Intra NUP50 Q9UKX7 KPNA2 Homo sapiens P52292
Anti Tag CoIP
33961781
Intra NUP50 Q9UKX7 KPNA2 Homo sapiens P52292
Y2H Prey Pooling
25416956
Intra NUP50 Q9UKX7 KPNA2 Homo sapiens P52292
Validated Y2H
25416956
Intra NUP50 Q9UKX7 KPNA2 Homo sapiens P52292
Y2H Prey Pooling
32296183
Intra NUP50 Q9UKX7 KPNA3 Homo sapiens O00505
Y2H Prey Pooling
25416956
Intra NUP50 Q9UKX7 KPNA3 Homo sapiens O00505
Y2H Prey Pooling
32296183
Intra NUP50 Q9UKX7 KPNA3 Homo sapiens O00505
Anti Tag CoIP
33961781
Intra NUP50 Q9UKX7 KPNA3 Homo sapiens O00505
Y2H Array
32296183
Intra NUP50 Q9UKX7 KPNA1 Homo sapiens P52294
Y2H Prey Pooling
32296183
Intra NUP50 Q9UKX7 KPNA1 Homo sapiens P52294
Y2H Array
25416956
Intra NUP50 Q9UKX7 KPNA1 Homo sapiens P52294
Y2H Array
32296183
Intra NUP50 Q9UKX7 KPNA1 Homo sapiens P52294
Anti Tag CoIP
33961781
Intra NUP50 Q9UKX7 KPNA1 Homo sapiens P52294
Y2H Array
31515488
Intra NUP50 Q9UKX7 KPNA6 Homo sapiens O60684
Y2H Prey Pooling
25416956
Intra NUP50 Q9UKX7 KPNA6 Homo sapiens O60684
Y2H Prey Pooling
32296183
Intra NUP50 Q9UKX7 KPNA6 Homo sapiens O60684
Anti Tag CoIP
33961781
Intra NUP50 Q9UKX7 KPNA6 Homo sapiens O60684
Y2H Array
32296183
Intra NUP50 Q9UKX7 KPNA4 Homo sapiens O00629
Y2H Array
32296183
Intra NUP50 Q9UKX7 KPNA4 Homo sapiens O00629
Y2H Prey Pooling
25416956
Intra NUP50 Q9UKX7 KPNA4 Homo sapiens O00629
Anti Tag CoIP
33961781
Intra NUP50 Q9UKX7 KPNA4 Homo sapiens O00629
Y2H Prey Pooling
32296183
Intra NUP50 Q9UKX7 KPNA5 Homo sapiens O15131
Y2H Array
31515488
Intra NUP50 Q9UKX7 KPNA5 Homo sapiens O15131
Y2H Array
32296183
Intra NUP50 Q9UKX7 KPNA5 Homo sapiens O15131
Y2H Array
25416956
Intra NUP50 Q9UKX7 KPNA5 Homo sapiens O15131
Anti Tag CoIP
33961781
Intra NUP50 Q9UKX7 KPNA5 Homo sapiens O15131
Y2H Prey Pooling
32296183
Intra NUP50 Q9UKX7 KEAP1 Homo sapiens Q14145
Y2H Array
32296183
Intra NUP50 Q9UKX7 KEAP1 Homo sapiens Q14145
Y2H Prey Pooling
32296183
种属间: 跨种属相互作用 种属内: 同种属相互作用

直系同源

种属 基因名 来源 基因 ID
Felis catus NUP50 VGNC VGNC:68599
Canis familiaris NUP50 VGNC VGNC:44056
Rattus norvegicus NUP50 RGD RGD:3191
Mus musculus NUP50 MGD MGI:1351502
Macaca mulatta NUP50 VGNC VGNC:75561
Bos taurus NUP50 VGNC VGNC:32362
Others NUP50 NCBI